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AT3G02740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31541795 (2020): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G36260.1); Has 4403 Blast hits to 4392 proteins in 396 species: Archae - 0; Bacteria - 0; Metazoa - 1232; Fungi - 945; Plants - 1948; Viruses - 0; Other Eukaryotes - 278 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G02740-MONOMEReggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:AC018363
EMBL:AY088014EMBL:CP002686EnsemblPlants:AT3G02740EnsemblPlants:AT3G02740.1
entrez:821256Gene3D:2.40.70.10GeneID:821256GO:GO:0004190
GO:GO:0005886GO:GO:0009506GO:GO:0031225Gramene:AT3G02740.1
hmmpanther:PTHR13683hmmpanther:PTHR13683:SF288HOGENOM:HOG000006100IntAct:Q9M8R6
InterPro:IPR001461InterPro:IPR001969InterPro:IPR021109InterPro:IPR032799
InterPro:IPR032861InterPro:IPR033121KEGG:ath:AT3G02740MEROPS:A01.A23
OMA:NCAGCIRPANTHER:PTHR13683Pfam:PF00026Pfam:PF14541
Pfam:PF14543Pfscan:PS51767PhylomeDB:Q9M8R6PRINTS:PR00792
PROSITE:PS00141PROSITE:PS51767Proteomes:UP000006548RefSeq:NP_186923.1
scanprosite:PS00141SMR:Q9M8R6STRING:3702.AT3G02740.1SUPFAM:SSF50630
TAIR:AT3G02740UniGene:At.43677UniProt:Q9M8R6
Coordinates (TAIR10) chr3:+:590561..593089
Molecular Weight (calculated) 52811.50 Da
IEP (calculated) 6.04
GRAVY (calculated) -0.02
Length 488 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLRRRQWFL SAILLSAALL IDPQFSTAAT ASENLVFEVR SKFAGKRVKD LGALRAHDVH RHSRLLSAID IPLGGDSQPE SIGLYFAKIG LGTPSRDFHV
101: QVDTGSDILW VNCAGCIRCP RKSDLVELTP YDVDASSTAK SVSCSDNFCS YVNQRSECHS GSTCQYVIMY GDGSSTNGYL VKDVVHLDLV TGNRQTGSTN
201: GTIIFGCGSK QSGQLGESQA AVDGIMGFGQ SNSSFISQLA SQGKVKRSFA HCLDNNNGGG IFAIGEVVSP KVKTTPMLSK SAHYSVNLNA IEVGNSVLEL
301: SSNAFDSGDD KGVIIDSGTT LVYLPDAVYN PLLNEILASH PELTLHTVQE SFTCFHYTDK LDRFPTVTFQ FDKSVSLAVY PREYLFQVRE DTWCFGWQNG
401: GLQTKGGASL TILGDMALSN KLVVYDIENQ VIGWTNHNCS GGIQVKDEES GAIYTVGAHN LSWSSSLAIT KLLTLVSLLI PFFCNVAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)