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AT3G21865.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peroxin 22
Curator
Summary (TAIR10)
Interacts with PEX4 in a yeast two-hybrid. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.
Computational
Description (TAIR10)
peroxin 22 (PEX22); Has 90 Blast hits to 90 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Protein Annotations
BioGrid:7073DNASU:821741eggNOG:ENOG410IG97eggNOG:ENOG410XXC3
EMBL:AB025634EMBL:AP000739EMBL:AY063961EMBL:AY086434
EMBL:AY096402EMBL:CP002686EnsemblPlants:AT3G21865EnsemblPlants:AT3G21865.1
entrez:821741GeneID:821741Genevisible:Q9LSX7GO:GO:0005778
GO:GO:0007031GO:GO:0015031GO:GO:0016021Gramene:AT3G21865.1
hmmpanther:PTHR34126hmmpanther:PTHR34126:SF1HOGENOM:HOG000006131InParanoid:Q9LSX7
IntAct:Q9LSX7iPTMnet:Q9LSX7KEGG:ath:AT3G21865OMA:EQFFGCV
PaxDb:Q9LSX7Pfam:Q9LSX7PhylomeDB:Q9LSX7PRIDE:Q9LSX7
PRO:PR:Q9LSX7Proteomes:UP000006548RefSeq:NP_566696.2STRING:3702.AT3G21865.1
TAIR:AT3G21865tair10-symbols:PEX22TMHMM:TMhelixUniGene:At.22498
UniGene:At.67037UniProt:Q9LSX7
Coordinates (TAIR10) chr3:-:7701308..7703218
Molecular Weight (calculated) 31400.50 Da
IEP (calculated) 8.21
GRAVY (calculated) -0.22
Length 283 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESSSPSPT EEIVRLIKRL SAYVAFKMSS LFSTTSIRNL DSRSIGAIAG LAIAVIFTWR AIRTPGEQRQ RRQPKRRIHN AETSSAAAAA SQSNLASSVA
101: PEVSSPREDN AVQDVVDQFF QPVKPTLGQI VRQKLSEGRK VTCRLLGVIL EETSPEELQK QATVRSSVLE VLLEITKYSD LYLMERVLDD ESEAKVLQAL
201: ENAGVFTSGG LVKDKVLFCS TEIGRTSFVR QLEPDWHIDT NPEISTQLAR FIKYQLHVAT VKPERTAPNV FTSQSIEQFF GSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)