AT4G17270.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:golgi 0.641 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Mo25 family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 574 Blast hits to 572 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 219; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:9676406..9678568 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 39652.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.59 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 343 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MRGLFKSKPR TPADIVRQTR DLLLYADRSN SFPDLRESKR EEKMVELSKS IRDLKLILYG NSEAEPVAEA CAQLTQEFFK ADTLRRLLTS LPNLNLEARK 101: DATQVVANLQ RQQVNSRLIA ADYLESNIDL MDFLVDGFEN TDMALHYGTM FRECIRHQIV AKYVLDSEHV KKFFYYIQLP NFDIAADAAA TFKELLTRHK 201: STVAEFLIKN EDWFFADYNS KLLESTNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSMDN LRILMNLLRE SSKTIQIEAF HVFKLFVANQ NKPSDIANIL 301: VANRNKLLRL LADIKPDKED ERFDADKAQV VREIANLKLR ELA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)