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AT4G17270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.641
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Mo25 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 574 Blast hits to 572 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 219; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
Protein Annotations
BioGrid:12734eggNOG:ENOG410XP4SeggNOG:KOG1566EMBL:AF380659
EMBL:AL161546EMBL:AY055792EMBL:CP002687EMBL:Z97343
EnsemblPlants:AT4G17270EnsemblPlants:AT4G17270.1entrez:827441Gene3D:1.25.10.10
GeneID:827441Genevisible:Q9M0M4GO:GO:0005886Gramene:AT4G17270.1
hmmpanther:PTHR10182hmmpanther:PTHR10182:SF12HOGENOM:HOG000234711InParanoid:Q9M0M4
IntAct:Q9M0M4InterPro:IPR011989InterPro:IPR013878InterPro:IPR016024
KEGG:ath:AT4G17270KO:K08272OMA:IKNEDWFPANTHER:PTHR10182
PaxDb:Q9M0M4Pfam:PF08569Pfam:Q9M0M4PhylomeDB:Q9M0M4
PRIDE:Q9M0M4PRO:PR:Q9M0M4ProteinModelPortal:Q9M0M4Proteomes:UP000006548
RefSeq:NP_193460.1SMR:Q9M0M4STRING:3702.AT4G17270.1SUPFAM:SSF48371
TAIR:AT4G17270UniGene:At.48869UniGene:At.63700UniProt:Q9M0M4
Coordinates (TAIR10) chr4:+:9676406..9678568
Molecular Weight (calculated) 39652.80 Da
IEP (calculated) 8.59
GRAVY (calculated) -0.32
Length 343 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGLFKSKPR TPADIVRQTR DLLLYADRSN SFPDLRESKR EEKMVELSKS IRDLKLILYG NSEAEPVAEA CAQLTQEFFK ADTLRRLLTS LPNLNLEARK
101: DATQVVANLQ RQQVNSRLIA ADYLESNIDL MDFLVDGFEN TDMALHYGTM FRECIRHQIV AKYVLDSEHV KKFFYYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLIKN EDWFFADYNS KLLESTNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSMDN LRILMNLLRE SSKTIQIEAF HVFKLFVANQ NKPSDIANIL
301: VANRNKLLRL LADIKPDKED ERFDADKAQV VREIANLKLR ELA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)