AT5G16590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to symbiotic fungus; LOCATED IN: plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:5431862..5433921 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67467.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.65 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 625 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKNKTNLGLS VFFFFICLVS VTSDLEADRR ALIALRDGVH GRPLLWNLTA PPCTWGGVQC ESGRVTALRL PGVGLSGPLP IAIGNLTKLE TLSFRFNALN 101: GPLPPDFANL TLLRYLYLQG NAFSGEIPSF LFTLPNIIRI NLAQNNFLGR IPDNVNSATR LATLYLQDNQ LTGPIPEIKI KLQQFNVSSN QLNGSIPDPL 201: SGMPKTAFLG NLLCGKPLDA CPVNGTGNGT VTPGGKGKSD KLSAGAIVGI VIGCFVLLLV LFLIVFCLCR KKKKEQVVQS RSIEAAPVPT SSAAVAKESN 301: GPPAVVANGA SENGVSKNPA AVSKDLTFFV KSFGEFDLDG LLKASAEVLG KGTFGSSYKA SFDHGLVVAV KRLRDVVVPE KEFREKLQVL GSISHANLVT 401: LIAYYFSRDE KLVVFEYMSR GSLSALLHGN KGSGRSPLNW ETRANIALGA ARAISYLHSR DATTSHGNIK SSNILLSESF EAKVSDYCLA PMISPTSTPN 501: RIDGYRAPEV TDARKISQKA DVYSFGVLIL ELLTGKSPTH QQLHEEGVDL PRWVSSITEQ QSPSDVFDPE LTRYQSDSNE NMIRLLNIGI SCTTQYPDSR 601: PTMPEVTRLI EEVSRSPASP GPLSD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)