AT4G27610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.918 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27620.2); Has 1304 Blast hits to 1173 proteins in 200 species: Archae - 14; Bacteria - 115; Metazoa - 628; Fungi - 104; Plants - 95; Viruses - 8; Other Eukaryotes - 340 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:13785648..13787332 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37370.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.77 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||||||||||
| Length | 334 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSTRRNGISK HQRGDKFCGE GPNWILIAGG ALLSTLSIRF GYKLKQSLDS KPQSNGSAGL KPNGTSERQK STSCCLHSTT SSCTQNNDFC CFRSIPGTES 101: VEGKEVTSEQ MISASDTSLP LVTVPAPSSK ENGVMWATSP DRLELPPRPY NHNSNCSDSP CVSETSSDIF SKREVIQKLR QQLKRRDDMI QEMQEQILEL 201: QNSYNAQTAH SSHLQAQLDT LNRDLFESER EVQRLRKAIA DHSVGCGADS NGKTSPVGPW NGGFMDSESN YESQEKSLRD GERVEMLRKE VSELKEVIDG 301: KEYLLRSYKE QKIELSQKVK ELQQRLDSQL QNLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)