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AT1G60630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G10850.1); Has 133252 Blast hits to 101001 proteins in 3013 species: Archae - 74; Bacteria - 10148; Metazoa - 33814; Fungi - 7963; Plants - 65926; Viruses - 266; Other Eukaryotes - 15061 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G60630-MONOMERBioGrid:27581eggNOG:ENOG410II01eggNOG:ENOG410YEDC
EMBL:AC002292EMBL:AK227473EMBL:BT006440EMBL:CP002684
EMBL:FJ708665EnsemblPlants:AT1G60630EnsemblPlants:AT1G60630.1entrez:842357
Gene3D:3.80.10.10GeneID:842357Genevisible:Q84MA9GO:GO:0004672
GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT1G60630.1
hmmpanther:PTHR27008hmmpanther:PTHR27008:SF40HOGENOM:HOG000116554InParanoid:Q84MA9
InterPro:IPR000719InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675
KEGG:ath:AT1G60630ncoils:CoilOMA:FQAKEECPaxDb:Q84MA9
Pfam:PF00069Pfam:PF08263Pfam:Q84MA9Pfscan:PS50011
PhylomeDB:Q84MA9PIR:E96631PRIDE:Q84MA9PRO:PR:Q84MA9
PROSITE:PS50011ProteinModelPortal:Q84MA9Proteomes:UP000006548RefSeq:NP_176262.2
SMR:Q84MA9SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G60630
TMHMM:TMhelixUniGene:At.36618UniProt:Q84MA9
Coordinates (TAIR10) chr1:-:22334754..22336785
Molecular Weight (calculated) 72377.70 Da
IEP (calculated) 8.84
GRAVY (calculated) -0.23
Length 652 amino acids
Sequence (TAIR10)
(BLAST)
001: MISSSSCMFF LVFAFFLISP VRSSDVEALL SLKSSIDPSN SIPWRGTDPC NWEGVKKCMK GRVSKLVLEN LNLSGSLNGK SLNQLDQLRV LSFKGNSLSG
101: SIPNLSGLVN LKSLYLNDNN FSGEFPESLT SLHRLKTVVL SRNRFSGKIP SSLLRLSRLY TFYVQDNLFS GSIPPLNQAT LRFFNVSNNQ LSGHIPPTQA
201: LNRFNESSFT DNIALCGDQI QNSCNDTTGI TSTPSAKPAI PVAKTRSRTK LIGIISGSIC GGILILLLTF LLICLLWRRK RSKSKREERR SKRVAESKEA
301: KTAETEEGTS DQKNKRFSWE KESEEGSVGT LVFLGRDITV VRYTMDDLLK ASAETLGRGT LGSTYKAVME SGFIITVKRL KDAGFPRMDE FKRHIEILGR
401: LKHPNLVPLR AYFQAKEECL LVYDYFPNGS LFSLIHGSKV SGSGKPLHWT SCLKIAEDLA MGLVYIHQNP GLTHGNLKSS NVLLGPDFES CLTDYGLSDL
501: HDPYSIEDTS AASLFYKAPE CRDLRKASTQ PADVYSFGVL LLELLTGRTS FKDLVHKYGS DISTWVRAVR EEETEVSEEL NASEEKLQAL LTIATACVAV
601: KPENRPAMRE VLKMVKDARA EAALFSFNSS DHSPGRWSDT IQSLPREDHM SI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)