AT4G03390.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : STRUBBELIG-receptor family 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
STRUBBELIG-receptor family 3 (SRF3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 1 (TAIR:AT2G20850.1); Has 154480 Blast hits to 110338 proteins in 3974 species: Archae - 96; Bacteria - 13338; Metazoa - 40210; Fungi - 7879; Plants - 76281; Viruses - 315; Other Eukaryotes - 16361 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:1490912..1494553 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 84724.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.00 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 776 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAAKRSIYCL LLLPLLLSLL IWIPSISLAA TNPDDVAAIN GLFAALGAPV LPGWIASGGD PCGEAWQGII CNVSDIISIT VNAANLQGEL GDNLAKFTSI 101: RGIDFSNNRI GGSIPSTLPV TLQHFFLSAN QFTGSIPESL GTLSFLNDMS LNDNLLSGEL PDVFQNLVGL INLDISSNNI SGTLPPSMEN LLTLTTLRVQ 201: NNQLSGTLDV LQGLPLQDLN IENNLFSGPI PDKLLSIPKF LHEGNPFNAT MINSTSTAPS LSPSLSPTKP APTRPFSGVP PPPNERNRGK VADGPSDSEG 301: SSSENSKGKN SSHTKKIILI AFAGVLVFII LVLAILLLLP KCARRREHAN RVFKPHQVGA DRGSRENALE NGTPVLPPPG RSEKVQREPF KKAGEEPKVL 401: HDLERLRRPA PISRQESQDI DFSMLMPPPP PPPPPPPPPP LDEKVTVMPI ISPERPVKKT SPKRLPLTSV KHYSIASLQQ YTESFAQENL IGSGMLGSVY 501: RARLPNGKLF AVKKLDKRAS EQQQDHEFIE LVNNIDMIRH SNIVELVGYC AEHDQRLLVY EYCSNGTLQD GLHSDDEFKK KLSWNTRVSM ALGAARALEY 601: LHEVCEPPII HRNFKSANVL LDDDLSVLVS DCGLAPLISS GSVSQLSGQL LAAYGYGAPE FDSGIYTWQS DVYSFGVVML ELLTGRMSYD RDRSRGEQFL 701: VRWAIPQLHD IDALGKMVDP SLNGQYPAKS LSHFADIISR CVQSEPEFRP LMSEVVQDLL DMIRRERHGS GDSTAD |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)