AT2G41490.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : UDP-glcnac-adolichol phosphate glcnac-1-p-transferase | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase | ||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
UDP-glcnac-adolichol phosphate glcnac-1-p-transferase (GPT); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 4 protein (TAIR:AT3G57220.1); Has 6620 Blast hits to 6619 proteins in 2189 species: Archae - 133; Bacteria - 5202; Metazoa - 126; Fungi - 129; Plants - 61; Viruses - 0; Other Eukaryotes - 969 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:17301762..17304030 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 47727.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.59 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 431 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAARKRASSI SIPNKPDPSE PNSAPSEQKM TRKTVSASGE EFRLAPPKLG VIFVISTLLC SLYLYLLCFH YKVDNELKRS ILINAGLSLV GFFVTLKMIP 101: VTARYVLRRN MFGFDINKRG TPQGDIKVPE SLGIVVGIVF LIVAIIFQYF NFTEDSNWLV EYNAALASIC FMILLGFVDD VLDVPWRVKL VLPSFATLPL 201: LMAYAGHTTI VIPKPLVAYI GLEVLNLGRI YKLYMGLLAV FCTNSINIHA GLNGLEIGQT VVIAAAILIH NVMQIGASVD PEYHQAHAFS IFLTQPLMAT 301: SLAMLAYNWY PSSVFVGDTY TVFAGMTMAV VGILGHFSET LLIFFLPQVL NFLLSLPQLA GIVKCPRHRL PRYDPATGLL TGTKDGTLVN VYLRLFGPKS 401: EKSLCIHLLV FQALACAFCF ILRHFLAGWY K |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)