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AT2G41490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-glcnac-adolichol phosphate glcnac-1-p-transferase
Curator
Summary (TAIR10)
UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase
Computational
Description (TAIR10)
UDP-glcnac-adolichol phosphate glcnac-1-p-transferase (GPT); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 4 protein (TAIR:AT3G57220.1); Has 6620 Blast hits to 6619 proteins in 2189 species: Archae - 133; Bacteria - 5202; Metazoa - 126; Fungi - 129; Plants - 61; Viruses - 0; Other Eukaryotes - 969 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G41490-MONOMEReggNOG:COG0472eggNOG:KOG2788EMBL:AC002510
EMBL:AC004625EMBL:AF412104EMBL:AY090264EMBL:CP002685
EMBL:D88036EMBL:D88037EnsemblPlants:AT2G41490EnsemblPlants:AT2G41490.1
entrez:818747GeneID:818747GO:GO:0005789GO:GO:0006047
GO:GO:0006487GO:GO:0008963GO:GO:0016021GO:GO:0019348
Gramene:AT2G41490.1gramene_pathway:2.7.8.15gramene_pathway:MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESISgramene_plant_reactome:1119573
gramene_plant_reactome:6873948hmmpanther:PTHR10571hmmpanther:PTHR10571:SF0HOGENOM:HOG000163915
InterPro:IPR000715KEGG:00550+2.7.8.13KEGG:ath:AT2G41490KO:K01001
OMA:AIFCTNSPfam:PF00953PhylomeDB:O22211PIR:T00805
PIR:T50678Proteomes:UP000006548Reactome:R-ATH-446193RefSeq:NP_565950.1
STRING:3702.AT2G41490.1TAIR:AT2G41490tair10-symbols:GPTTMHMM:TMhelix
UniGene:At.12395UniGene:At.42825unipathway:UPA00219UniProt:O22211
Coordinates (TAIR10) chr2:+:17301762..17304030
Molecular Weight (calculated) 47727.50 Da
IEP (calculated) 9.10
GRAVY (calculated) 0.59
Length 431 amino acids
Sequence (TAIR10)
(BLAST)
001: MAARKRASSI SIPNKPDPSE PNSAPSEQKM TRKTVSASGE EFRLAPPKLG VIFVISTLLC SLYLYLLCFH YKVDNELKRS ILINAGLSLV GFFVTLKMIP
101: VTARYVLRRN MFGFDINKRG TPQGDIKVPE SLGIVVGIVF LIVAIIFQYF NFTEDSNWLV EYNAALASIC FMILLGFVDD VLDVPWRVKL VLPSFATLPL
201: LMAYAGHTTI VIPKPLVAYI GLEVLNLGRI YKLYMGLLAV FCTNSINIHA GLNGLEIGQT VVIAAAILIH NVMQIGASVD PEYHQAHAFS IFLTQPLMAT
301: SLAMLAYNWY PSSVFVGDTY TVFAGMTMAV VGILGHFSET LLIFFLPQVL NFLLSLPQLA GIVKCPRHRL PRYDPATGLL TGTKDGTLVN VYLRLFGPKS
401: EKSLCIHLLV FQALACAFCF ILRHFLAGWY K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)