AT2G44660.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : ALG6, ALG8 glycosyltransferase family | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT5G38460.2); Has 667 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 16; Metazoa - 273; Fungi - 247; Plants - 67; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:18420832..18422827 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 58225.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.12 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.52 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 506 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDHREKSDRR LLLWFFAVAT AVKLLLIPSS RSTDFEVHRN WLAITNSLPL TKWYFDETSQ WTLDYPPFFA YFERFLSIFA RLVDPRIVDL QSGLDYNAES 101: VIYFQRISVI VSDLCLLYGV YRLTRKLEPL KRNLICALVI WSPGLLIVDH IHFQYNGFLL GWLLLSISFL QEGRDLLGGF LFAVLLCFKH LFAVTAPVYF 201: VYLLRHYCWS GLVTGFRRLV TIGAVVVAVF AAAYGPFIYH GQIQQVISRM FPFGRGLCHA YWAPNFWVFY IILDKGLAVL LRKLGYEIQI PSASFTGGLV 301: GDSSPFAVLP QITPLTTFAM VLLAISPCLI KAWKKPHSGL VARWVAYAYT CGFLFGWHVH EKASLHFTIP LAIVAVQSLE DAKHYFLVSI VSCYSLYPLL 401: YEPQEYPIKV LLLLLHSVVM WLGFAAQYTD YKAQKKETSE IKSKFRIGCF EKSYLMGLII VEIVSQFLHP YFLGDKLPFL PLMLISTYCT VGIMYSWIWQ 501: LRKILT |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)