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AT3G62600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : DNAJ heat shock family protein
Curator
Summary (TAIR10)
J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.
Computational
Description (TAIR10)
ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink).
Protein Annotations
BioGrid:10748eggNOG:COG0484eggNOG:KOG0713EMBL:AL162651
EMBL:AY087640EMBL:AY094429EMBL:AY125534EMBL:CP002686
EnsemblPlants:AT3G62600EnsemblPlants:AT3G62600.1entrez:825434Gene3D:1.10.287.110
GeneID:825434Genevisible:Q9LZK5GO:GO:0005783GO:GO:0005788
GO:GO:0005886GO:GO:0006457GO:GO:0052033Gramene:AT3G62600.1
hmmpanther:PTHR24078hmmpanther:PTHR24078:SF257HOGENOM:HOG000226718InParanoid:Q9LZK5
IntAct:Q9LZK5InterPro:IPR001623InterPro:IPR002939InterPro:IPR008971
InterPro:IPR018253iPTMnet:Q9LZK5KEGG:ath:AT3G62600KO:K09517
MINT:MINT-7950352ncoils:CoilOMA:LCLCGEAPaxDb:Q9LZK5
Pfam:PF00226Pfam:PF01556Pfam:Q9LZK5Pfscan:PS50076
PhylomeDB:Q9LZK5PIR:T48049PRIDE:Q9LZK5PRINTS:PR00625
PRO:PR:Q9LZK5PROSITE:PS00636PROSITE:PS50076ProteinModelPortal:Q9LZK5
Proteomes:UP000006548RefSeq:NP_191819.1scanprosite:PS00636SMART:SM00271
SMR:Q9LZK5STRING:3702.AT3G62600.1SUPFAM:SSF46565SUPFAM:SSF49493
TAIR:AT3G62600tair10-symbols:ATERDJ3Btair10-symbols:ERDJ3BUniGene:At.22914
UniProt:Q9LZK5
Coordinates (TAIR10) chr3:-:23151038..23153346
Molecular Weight (calculated) 39201.70 Da
IEP (calculated) 6.20
GRAVY (calculated) -0.62
Length 346 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)