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AT1G14440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : homeobox protein 31
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 602 Blast hits to 562 proteins in 67 species: Archae - 0; Bacteria - 10; Metazoa - 45; Fungi - 3; Plants - 505; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKHYeggNOG:ENOG410YG6UEMBL:AB493456EMBL:AC012188
EMBL:AY074266EMBL:AY096738EMBL:CP002684EnsemblPlants:AT1G14440
EnsemblPlants:AT1G14440.1EnsemblPlants:AT1G14440.2entrez:838006Gene3D:1.10.10.60
GeneID:838006Genevisible:Q9M9S0GO:GO:0003677GO:GO:0005634
GO:GO:0006351GO:GO:0006355GO:GO:0042803GO:GO:0046872
GO:GO:0048574Gramene:AT1G14440.1Gramene:AT1G14440.2hmmpanther:PTHR31948
hmmpanther:PTHR31948:SF19HOGENOM:HOG000238105InParanoid:Q9M9S0IntAct:Q9M9S0
InterPro:IPR006455InterPro:IPR006456InterPro:IPR009057KEGG:ath:AT1G14440
OMA:SESEDFMPaxDb:Q9M9S0Pfam:PF04770Pfam:Q9M9S0
Pfscan:PS51523PhylomeDB:Q9M9S0PIR:A86279PRIDE:Q9M9S0
PRO:PR:Q9M9S0ProDom:PD125774PROSITE:PS51523ProteinModelPortal:Q9M9S0
Proteomes:UP000006548RefSeq:NP_172896.1RefSeq:NP_973826.1SMR:Q9M9S0
STRING:3702.AT1G14440.1SUPFAM:SSF46689TAIR:AT1G14440tair10-symbols:AtHB31
tair10-symbols:HB31tair10-symbols:ZHD4TIGRfam:TIGR01565TIGRfam:TIGR01566
TIGRFAMs:TIGR01565TIGRFAMs:TIGR01566UniGene:At.41972UniProt:Q9M9S0
Coordinates (TAIR10) chr1:-:4939076..4940014
Molecular Weight (calculated) 35483.90 Da
IEP (calculated) 7.63
GRAVY (calculated) -0.95
Length 312 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIASQEDHD MPIPLNTTFG GGGSHGHMIH HHDHHAANSA PPTHNNNNTT QPPPMPLHGN GHGNNYDHHH HQDPHHVGYN AIIKKPMIKY KECLKNHAAA
101: MGGNATDGCG EFMPSGEDGS IEALTCSACN CHRNFHRKEV EGELAATAMS PYHQHPPHRK LMLNHQKIRS AMPHQMIMPI GVSNYRYMHN NSESEDFMEE
201: DGVTTASRSL PNLPYNQKKR FRTKFTPEQK EKMLSFAEKV GWKIQRQEDC VVQRFCEEIG VKRRVLKVWM HNNKIHFSKK NNINLEDNDN EKINNLNNVD
301: LSGNNDMTKI VP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)