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AT4G01330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15308754 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G01540.2); Has 119298 Blast hits to 117942 proteins in 4492 species: Archae - 112; Bacteria - 14190; Metazoa - 44161; Fungi - 9319; Plants - 33617; Viruses - 462; Other Eukaryotes - 17437 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002687EnsemblPlants:AT4G01330
EnsemblPlants:AT4G01330.1entrez:828117ExpressionAtlas:F4JI11GeneID:828117
GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT4G01330.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF156InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441PaxDb:F4JI11Pfam:PF00069
Pfscan:PS50011PRIDE:F4JI11PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:F4JI11Proteomes:UP000006548RefSeq:NP_192042.5
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:F4JI11
STRING:3702.AT4G01330.2SUPFAM:SSF56112TAIR:AT4G01330TMHMM:TMhelix
UniGene:At.50312UniProt:F4JI11
Coordinates (TAIR10) chr4:+:550723..552847
Molecular Weight (calculated) 53538.20 Da
IEP (calculated) 7.12
GRAVY (calculated) -0.26
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MTMSIFNPDS INNELSKPTS IFGLKLWVVI GILLGSLIVI ALFFLSLCLT SRRRNRKPRH ADFASAAVAT PPISKEIQEI VRPPAQDHCH PTQPVAAEIQ
101: VDIGKTEHRV VFSDRVSSGE SRGTVSETAS YSGSGCVGPE VSHLGWGRWY TLRELEAATN GLCEENVIGE GGYGIVYSGI LTDGTKVAVK NLLNNRGQAE
201: KEFRVEVEAI GRVRHKNLVR LLGYCVEGAY RMLVYDYVDN GNLEQWIHGD VGDKSPLTWD IRMNIILCMA KGLAYLHEGL EPKVVHRDIK SSNILLDRQW
301: NAKVSDFGLA KLLFSESSYV TTRVMGTFGY VAPEYACTGM LTEKSDIYSF GILIMEIITG RNPVDYSRPQ GEVNLVEWLK TMVGNRRSEE VVDPKIPEPP
401: TSKALKRVLL VALRCVDPDA NKRPKMGHII HMLEAEDLFY RDERRATREH ASRDFNQPRT EISPAVAETS ESDSSKDRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)