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AT2G19230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Leucine-rich repeat transmembrane protein kinase protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT2G19210.1); Has 158021 Blast hits to 134137 proteins in 5487 species: Archae - 127; Bacteria - 15215; Metazoa - 50235; Fungi - 10889; Plants - 60573; Viruses - 492; Other Eukaryotes - 20490 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G19230-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IID2
EMBL:AC003058EMBL:CP002685EnsemblPlants:AT2G19230EnsemblPlants:AT2G19230.1
entrez:816440Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:816440
Genevisible:O64556GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0016021Gramene:AT2G19230.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44
HOGENOM:HOG000116550InParanoid:O64556InterPro:IPR000719InterPro:IPR001611
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788InterPro:IPR032675iPTMnet:O64556KEGG:ath:AT2G19230
ncoils:CoilPaxDb:O64556Pfam:O64556Pfam:PF00069
Pfam:PF12819Pfam:PF13855Pfscan:PS50011PhylomeDB:O64556
PIR:T01271PRIDE:O64556PRO:PR:O64556PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:O64556Proteomes:UP000006548
RefSeq:NP_179513.4scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:O64556STRING:3702.AT2G19230.1SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT2G19230TMHMM:TMhelixUniGene:At.52827UniProt:O64556
Coordinates (TAIR10) chr2:-:8343452..8348431
Molecular Weight (calculated) 115565.00 Da
IEP (calculated) 5.86
GRAVY (calculated) -0.29
Length 1025 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGNFNFLPLV SFASFVVVLV LVCAQDQSGF VSIDCGIPED SSYYDEKTDI KYISDAAFVE SGTIHSIDSK FQKKNLEKQF QKVRSFPEGK KNCYDVQPPQ
0101: GKGFKYLIRT RFMYGNYDNL GKAPDFDLYL GVNLWDSVTL ENSTTIVTKE IIYTLRSDKV HVCLVDKERG TPFLSVLELR LLKNNIYETA SDSLMLYRRW
0201: DLGATGDLPA RYKDDIFDRF WMPLMFPNFL ILNTSLMIDP TSSNGFLPPS VVMSTAVAPM NSSIEQIMVY WEPRDPNWKF YIYIHFAEVE KLPSNETREF
0301: SVFLNKEQID TTSVFRPSYL YTDTLYVQNP VSGPFLEFVL RQGVKSTRPP IMNAIETYRT NEFLDLPTDQ NDVDAIMKIK TKYKVKKNWL GDPCAPFGYP
0401: WQGINCSYTA NNPPRIISVN LSFSGLTGQI DPVFITLTPL QKLDLSNNRL TGTVPDFLAN LPDLTELNLE ENKLTGILPE KLLERSKDGS LSLRVGGNPD
0501: LCVSDSCRNK KTERKEYIIP SVASVTGLFF LLLALISFWQ FKKRQQTGVK TGPLDTKRYY KYSEIVEITN NFERVLGQGG FGKVYYGVLR GEQVAIKMLS
0601: KSSAQGYKEF RAEVELLLRV HHKNLIALIG YCHEGDQMAL IYEYIGNGTL GDYLSGKNSS ILSWEERLQI SLDAAQGLEY LHNGCKPPIV HRDVKPTNIL
0701: INEKLQAKIA DFGLSRSFTL EGDSQVSTEV AGTIGYLDPE HYSMQQFSEK SDVYSFGVVL LEVITGQPVI SRSRTEENRH ISDRVSLMLS KGDIKSIVDP
0801: KLGERFNAGL AWKITEVALA CASESTKTRL TMSQVVAELK ESLCRARTSG DSGDISFSEP TEMNVSMTVD PGVLPQPRNE YPVTQPDAVN STDKSVGITK
0901: EHNLLHGIVQ WFRKLKHTLS SEETSDRKAS DATKTSDQWR LKSESDEDSE EPWPVHALTH SGNKYEYVSF LPLVAVELVF QQEPSLVQAG LIGNFAKTNL
1001: IEKGQVTATT ALKELRKLSN LLSEM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)