AT2G19230.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Leucine-rich repeat transmembrane protein kinase protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT2G19210.1); Has 158021 Blast hits to 134137 proteins in 5487 species: Archae - 127; Bacteria - 15215; Metazoa - 50235; Fungi - 10889; Plants - 60573; Viruses - 492; Other Eukaryotes - 20490 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:8343452..8348431 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 115565.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.86 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 1025 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
0001: MGNFNFLPLV SFASFVVVLV LVCAQDQSGF VSIDCGIPED SSYYDEKTDI KYISDAAFVE SGTIHSIDSK FQKKNLEKQF QKVRSFPEGK KNCYDVQPPQ 0101: GKGFKYLIRT RFMYGNYDNL GKAPDFDLYL GVNLWDSVTL ENSTTIVTKE IIYTLRSDKV HVCLVDKERG TPFLSVLELR LLKNNIYETA SDSLMLYRRW 0201: DLGATGDLPA RYKDDIFDRF WMPLMFPNFL ILNTSLMIDP TSSNGFLPPS VVMSTAVAPM NSSIEQIMVY WEPRDPNWKF YIYIHFAEVE KLPSNETREF 0301: SVFLNKEQID TTSVFRPSYL YTDTLYVQNP VSGPFLEFVL RQGVKSTRPP IMNAIETYRT NEFLDLPTDQ NDVDAIMKIK TKYKVKKNWL GDPCAPFGYP 0401: WQGINCSYTA NNPPRIISVN LSFSGLTGQI DPVFITLTPL QKLDLSNNRL TGTVPDFLAN LPDLTELNLE ENKLTGILPE KLLERSKDGS LSLRVGGNPD 0501: LCVSDSCRNK KTERKEYIIP SVASVTGLFF LLLALISFWQ FKKRQQTGVK TGPLDTKRYY KYSEIVEITN NFERVLGQGG FGKVYYGVLR GEQVAIKMLS 0601: KSSAQGYKEF RAEVELLLRV HHKNLIALIG YCHEGDQMAL IYEYIGNGTL GDYLSGKNSS ILSWEERLQI SLDAAQGLEY LHNGCKPPIV HRDVKPTNIL 0701: INEKLQAKIA DFGLSRSFTL EGDSQVSTEV AGTIGYLDPE HYSMQQFSEK SDVYSFGVVL LEVITGQPVI SRSRTEENRH ISDRVSLMLS KGDIKSIVDP 0801: KLGERFNAGL AWKITEVALA CASESTKTRL TMSQVVAELK ESLCRARTSG DSGDISFSEP TEMNVSMTVD PGVLPQPRNE YPVTQPDAVN STDKSVGITK 0901: EHNLLHGIVQ WFRKLKHTLS SEETSDRKAS DATKTSDQWR LKSESDEDSE EPWPVHALTH SGNKYEYVSF LPLVAVELVF QQEPSLVQAG LIGNFAKTNL 1001: IEKGQVTATT ALKELRKLSN LLSEM |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)