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AT2G07040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth.
Computational
Description (TAIR10)
PRK2A; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen tube growth; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G35390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G07040-MONOMERDIP:DIP-46187NEC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IKD5EMBL:AC005171EMBL:BT003936EMBL:BT005118
EMBL:CP002685EMBL:FJ708690EnsemblPlants:AT2G07040EnsemblPlants:AT2G07040.1
entrez:815274Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:815274
Genevisible:Q84JQ4GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0009846GO:GO:0009860GO:GO:0016021GO:GO:0080092
GO:GO:0090406Gramene:AT2G07040.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF31
HOGENOM:HOG000116554InterPro:IPR000719InterPro:IPR011009InterPro:IPR013210
InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT2G07040ncoils:Coil
PaxDb:Q84JQ4Pfam:PF00069Pfam:PF08263Pfam:Q84JQ4
Pfscan:PS50011PhylomeDB:Q84JQ4PIR:G84481PRIDE:Q84JQ4
PRO:PR:Q84JQ4PROSITE:PS50011ProteinModelPortal:Q84JQ4Proteomes:UP000006548
RefSeq:NP_178721.3SMR:Q84JQ4STRING:3702.AT2G07040.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT2G07040tair10-symbols:ATPRK2Atair10-symbols:PRK2A
TMHMM:TMhelixUniGene:At.41024UniProt:Q84JQ4
Coordinates (TAIR10) chr2:+:2916621..2918760
Molecular Weight (calculated) 72525.70 Da
IEP (calculated) 8.83
GRAVY (calculated) -0.28
Length 647 amino acids
Sequence (TAIR10)
(BLAST)
001: MESKCLMFVS IVSVFFMVVN GVSETETLLK FKNSLVIGRA NALESWNRRN PPCKWTGVLC DRGFVWGLRL ENLELSGSID IEALMGLNSL RSLSFINNKF
101: KGPFPEFKKL VALKSLYLSN NQFDLEIPKD AFDGMGWLKK LHLEQNNFIG EIPTSLVKSP KLIELRLDGN RFTGQIPEFR HHPNMLNLSN NALAGQIPNS
201: FSTMDPKLFE GNKGLCGKPL DTKCSSPYNH SSEPKSSTKK TSSKFLYIVA AAVAALAASL IIIGVVIFLI RRRKKKQPLL SAEPGPSSLQ MRAGIQESER
301: GQGSYHSQNR AAKKMIHTTK LSFLRDDKGK FELQDLLKAS AEILGSGCFG ASYKTLLSNG SVMVVKRFKH MNSAGIDEFQ EHMKRLGRLN HENLLPIVAY
401: YYKKEEKLFV SDFVANGSLA AHLHGHKSLG QPSLDWPTRF NIVKGVGRGL LYLHKNLPSL MAPHGHLKSS NVLLSEKFEP LLMDYGLIPM INEESAQELM
501: VAYKSPEYVK QSRVTKKTDV WGLGVLILEI LTGKLLESFS QVDKESEEDL ASWVRSSFKG EWTQELFDQE MGKTSNCEAH ILNLMRIGLS CCEVDVEKRL
601: DIREAVEKME DLMKEREQGD DDFYSTYASE ADGRSSRGLS SEGINLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)