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AT1G61563.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ralf-like 8
Curator
Summary (TAIR10)
Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Computational
Description (TAIR10)
ralf-like 8 (RALFL8); FUNCTIONS IN: signal transducer activity; INVOLVED IN: N-terminal protein myristoylation, cell-cell signaling; LOCATED IN: apoplast; EXPRESSED IN: flower; EXPRESSED DURING: rosette growth complete; CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 9 (TAIR:AT1G61566.1); Has 33 Blast hits to 33 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JJICeggNOG:ENOG41115XWEMBL:AC005850EMBL:AY087155
EMBL:BT025636EMBL:CP002684EnsemblPlants:AT1G61563EnsemblPlants:AT1G61563.1
entrez:842451GeneID:842451Genevisible:Q1ECR9GO:GO:0004871
GO:GO:0005179GO:GO:0005622GO:GO:0007267GO:GO:0019722
GO:GO:0048046Gramene:AT1G61563.1hmmpanther:PTHR34270hmmpanther:PTHR34270:SF1
HOGENOM:HOG000015121InParanoid:Q1ECR9InterPro:IPR008801KEGG:ath:AT1G61563
OMA:EGCHRETPaxDb:Q1ECR9Pfam:PF05498Pfam:Q1ECR9
PhylomeDB:Q1ECR9PRIDE:Q1ECR9PRO:PR:Q1ECR9Proteomes:UP000006548
RefSeq:NP_564778.1STRING:3702.AT1G61563.1TAIR:AT1G61563tair10-symbols:RALFL8
TMHMM:TMhelixUniGene:At.36416UniProt:Q1ECR9
Coordinates (TAIR10) chr1:-:22715081..22715329
Molecular Weight (calculated) 8906.96 Da
IEP (calculated) 9.93
GRAVY (calculated) -0.22
Length 82 amino acids
Sequence (TAIR10)
(BLAST)
1: MGMSKSIKVI LSLALVVFLA LAGTKVEASV RYITYPAIDR GDHAVHCDKA HPNTCKKKQA NPYRRGCGVL EGCHRETGPK PT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)