AT5G28680.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Malectin/receptor-like protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ANXUR2 (ANX2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen tube growth; LOCATED IN: apical plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT3G04690.1); Has 115671 Blast hits to 114295 proteins in 4417 species: Archae - 97; Bacteria - 12752; Metazoa - 43268; Fungi - 9644; Plants - 32773; Viruses - 427; Other Eukaryotes - 16710 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:10719437..10722013 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94301.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.00 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 858 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNEKLRILFS FLCFFYVLLV SPSQSNGQDI SLSCGASEPA VDQDKKKWEP DTKFLKTPNT VHAPATYQDP SLLSTVPYMT SRIFTAPATY EIPVKGDKRH 101: MLRLHFYPST YTGLNILDSY FSVAANDLTL LSNFSAAITC QALTQAYLVR EYSLAPSEKD VLSIIFTPSD KHPKAFAFIN GIEVIPMPEL FDTASLVGFS 201: DQTSDTKTAN LQTMFRLNVG GQDIPGSQDS GGLTRTWYND APYIFSAGLG VTLQASNNFR IDYQKMPVST APADVYKTAR SQGPNGDINM KSNLTWMFQV 301: DTNFTYIMRL HFCEFQLAKI NQKVFNIFIN NRTAQGDTNP ADILGWTGGK GIPTYKDYAI YVDANTGGGG EEISLQMTPS TFGQPEYYDS QLNGLEIFKI 401: DTMKNLAGPN PKPSPMQANE DVKKDFQGDK RITAFVIGSA GGVAAVLFCA LCFTMYQRKR KFSGSDSHTS SWLPIYGNSH TSATKSTISG KSNNGSHLSN 501: LAAGLCRRFS LSEIKHGTHN FDESNVIGVG GFGKVYKGVI DGGTKVAIKK SNPNSEQGLN EFETEIELLS RLRHKHLVSL IGYCDEGGEM CLIYDYMSLG 601: TLREHLYNTK RPQLTWKRRL EIAIGAARGL HYLHTGAKYT IIHRDVKTTN ILLDENWVAK VSDFGLSKTG PNMNGGHVTT VVKGSFGYLD PEYFRRQQLT 701: EKSDVYSFGV VLFEVLCARP ALNPSLSKEQ VSLGDWAMNC KRKGTLEDII DPNLKGKINP ECLKKFADTA EKCLSDSGLD RPTMGDVLWN LEFALQLQET 801: ADGSRHRTPS NGGGSVDLGG GGGGVTVNIS AGESDLGDDL SSEENSGIFS QIVNPKGR |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)