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AT1G49270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.987
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G18810.1); Has 232577 Blast hits to 168786 proteins in 5227 species: Archae - 253; Bacteria - 43700; Metazoa - 77599; Fungi - 26672; Plants - 44681; Viruses - 3098; Other Eukaryotes - 36574 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G49270-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187
EMBL:AC007504EMBL:CP002684EMBL:DQ446346EnsemblPlants:AT1G49270
EnsemblPlants:AT1G49270.1entrez:841351GeneID:841351Genevisible:Q9XI96
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0016021
Gramene:AT1G49270.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF55HOGENOM:HOG000116550
InParanoid:Q9XI96InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G49270OMA:QHYNQND
PaxDb:Q9XI96Pfam:PF07714Pfam:Q9XI96Pfscan:PS50011
PhylomeDB:Q9XI96PIR:A96529PRIDE:Q9XI96PRO:PR:Q9XI96
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9XI96
Proteomes:UP000006548RefSeq:NP_175353.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9XI96STRING:3702.AT1G49270.1SUPFAM:SSF56112
TAIR:AT1G49270TMHMM:TMhelixUniGene:At.52092UniProt:Q9XI96
Coordinates (TAIR10) chr1:-:18227334..18230227
Molecular Weight (calculated) 74333.00 Da
IEP (calculated) 5.78
GRAVY (calculated) -0.71
Length 699 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEGQSPENS PPAPPPPSPP SPPSSNDQQT TSPPPSDNQE TTSPPPPSSP DIAPPPQQQQ ESPPPPLPEN SSDGSSSSSP PPPSDSSSQS QSPPPPSTSP
101: PQQSDNNGNK GNNNENNKGN DGSSGDGGNK NMSHTPPPPS KTSDHSSHSQ PRSLAPPTSN SGSNSSSNDG LNIGAVIGLV AAAGILFIVM ILLCVCCFRK
201: KKKKSKLDQM PYYGSNAYPA GKTGGDQYYN QNAATQQQQH YNQNDHIVNL PPPPGSMGTN WVSSPPPPPP GNWQPMPSPP APVSGGANVI QSGEMSSNFS
301: SGPYAPSLPP PHPSVALGFN NSTFTYEELA SATQGFSKDR LLGQGGFGYV HKGILPNGKE IAVKSLKAGS GQGEREFQAE VEIISRVHHR HLVSLVGYCS
401: NAGGQRLLVY EFLPNDTLEF HLHGKSGTVM DWPTRLKIAL GSAKGLAYLH EDCHPKIIHR DIKASNILLD HNFEAKVADF GLAKLSQDNN THVSTRVMGT
501: FGYLAPEYAS SGKLTEKSDV FSFGVMLLEL ITGRGPVDLS GDMEDSLVDW ARPLCMRVAQ DGEYGELVDP FLEHQYEPYE MARMVACAAA AVRHSGRRRP
601: KMSQIVRTLE GDASLDDLDD GVKPKQSSSG GEGSSDYEMG TYGAEMRKFR KVTLESRDYG ASSEYGATSE YGLDPSSSSS EEMHIGGSTS KTTTTNRGI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)