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AT3G47090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.754
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G47090-MONOMEReggNOG:COG0515eggNOG:COG4886eggNOG:ENOG410IH5R
EMBL:AL133292EMBL:CP002686EnsemblPlants:AT3G47090EnsemblPlants:AT3G47090.1
entrez:823862Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:823862
GO:GO:0004674GO:GO:0005524GO:GO:0009507GO:GO:0016021
Gramene:AT3G47090.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF39InterPro:IPR000719
InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675
KEGG:ath:AT3G47090OMA:EMFGIGKPfam:PF00069Pfam:PF08263
Pfam:PF13855Pfscan:PS50011PhylomeDB:Q9SD64PIR:T45645
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548
RefSeq:NP_190293.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMART:SM00369SMR:Q9SD64STRING:3702.AT3G47090.1SUPFAM:SSF52047
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT3G47090TMHMM:TMhelix
UniGene:At.53811UniProt:Q9SD64
Coordinates (TAIR10) chr3:-:17341512..17344645
Molecular Weight (calculated) 111140.00 Da
IEP (calculated) 6.79
GRAVY (calculated) 0.04
Length 1009 amino acids
Sequence (TAIR10)
(BLAST)
0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)