AT3G23010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.935 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 36 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 36 (RLP36); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 38 (TAIR:AT3G23120.1); Has 98934 Blast hits to 26273 proteins in 1049 species: Archae - 38; Bacteria - 5801; Metazoa - 19602; Fungi - 835; Plants - 65537; Viruses - 10; Other Eukaryotes - 7111 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8174858..8176645 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66002.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.04 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||
| Length | 595 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRLWDNDLKG NIPTSFANLT KLSELYLFGN QFTGGDTVLA NLTSLSIIDL SLNYFKSSIS ADLSGLHNLE RFSVYNNSFS GPFPLSLLMI PSLVHIDLSQ 101: NHFEGPIDFR NTFSLSRLRV LYVGFNNLDG LIPESISKLV NLEYLDVSHN NFGGQVPRSI SKVVNLTSVD LSYNKLEGQV PDFVWRSSKL DYVDLSYNSF 201: NCFAKSVEVI DGASLTMLNL GSNSVDGPFP KWICKVKDLY ALDLSNNHFN GSIPQCLKYS TYFHTLNLRN NSLSGVLPNL FIKDSQLRSL DVSSNNLVGK 301: LPKSLINCER IEFLNVKGNK IMDTFPFWLG SLPYLKVLML GSNAFYGPVY NPSAYLGFPS IRIIDISNNN FVGSLPQDYF ANWLEMSLVW SGSDIPQFKY 401: MGNVNFSTYD SIDLVYKGVE TDFDRIFEGF NAIDFSGNRF SGHIPGSIGL LSELRLLNLS GNAFTGNIPP SLANITNLES LDLSRNNLSG EIPISLGKLS 501: FLSNTNFSYN HLEGLIPQST QFATQNCSSF LGNLGLYGFR EICGESHHVP VPTTSQQPEE PLSESEDQLL NWIAAAIAFG PGMFCGLVIG HIFTS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)