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AT3G45860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 4
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase. Involved in programmed cell death and defense response to pathogen.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 4 (CRK4); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response to bacterium, defense response, programmed cell death, response to salicylic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 119379 Blast hits to 118105 proteins in 4551 species: Archae - 90; Bacteria - 13618; Metazoa - 44322; Fungi - 10003; Plants - 33611; Viruses - 380; Other Eukaryotes - 17355 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G45860-MONOMERBioGrid:9049EC:2.7.11.-eggNOG:COG0515
eggNOG:ENOG410IKV1EMBL:AL162459EMBL:CP002686EnsemblPlants:AT3G45860
EnsemblPlants:AT3G45860.1entrez:823729Gene3D:2.60.120.200GeneID:823729
Genevisible:Q9LZU4GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0006468GO:GO:0009506GO:GO:0009751GO:GO:0012501
GO:GO:0016021GO:GO:0042742Gramene:AT3G45860.1hmmpanther:PTHR27002
HOGENOM:HOG000116550InParanoid:Q9LZU4InterPro:IPR000719InterPro:IPR001245
InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441KEGG:ath:AT3G45860OMA:NYRINEVPaxDb:Q9LZU4
Pfam:PF01657Pfam:PF07714Pfam:Q9LZU4Pfscan:PS50011
Pfscan:PS51473PhylomeDB:Q9LZU4PIR:T47526PRIDE:Q9LZU4
PRO:PR:Q9LZU4PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51473ProteinModelPortal:Q9LZU4Proteomes:UP000006548RefSeq:NP_190172.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9LZU4
STRING:3702.AT3G45860.1SUPFAM:SSF56112TAIR:AT3G45860tair10-symbols:CRK4
TMHMM:TMhelixUniGene:At.35982UniProt:Q9LZU4
Coordinates (TAIR10) chr3:-:16863401..16866041
Molecular Weight (calculated) 75926.90 Da
IEP (calculated) 8.61
GRAVY (calculated) -0.13
Length 676 amino acids
Sequence (TAIR10)
(BLAST)
001: MSFFWLFPFL LHLSFADSLS PLSAPVQNFI HLNHSCPSSI LTYSRNSTYF TNLKTLLSSL SSRNASYSTG FQTATAGQAP DRVTGLFLCR GDVSQEVCRN
101: CVAFSVKETL YWCPYNKEVV LYYDECMLRY SHRNILSTVT YDGSAILLNG ANISSSNQNQ VDEFRDLVSS TLNLAAVEAA NSSKKFYTRK VITPQPLYLL
201: VQCTPDLTRQ DCLRCLQKSI KGMSLYRIGG RFFYPSCNSR YENYSFYNET ATRSSSPPSL PPRSTPQQQL KLAPPPLISE RGKGRNSSVI IVVVVPIIAL
301: LLLFVAFFSL RAKKTRTNYE REPLTEESDD ITTAGSLQFD FKAIEAATNK FCETNKLGQG GFGEVYKGIF PSGVQVAVKR LSKTSGQGER EFANEVIVVA
401: KLQHRNLVRL LGFCLERDER ILVYEFVPNK SLDYFIFDST MQSLLDWTRR YKIIGGIARG ILYLHQDSRL TIIHRDLKAG NILLGDDMNA KIADFGMARI
501: FGMDQTEANT RRIVGTYGYM SPEYAMYGQF SMKSDVYSFG VLVLEIISGK KNSNVYQMDG TSAGNLVTYT WRLWSNGSPL ELVDPSFRDN YRINEVSRCI
601: HIALLCVQEE AEDRPTMSAI VQMLTTSSIA LAVPQRPGFF FRSSKHEQVG LVDRLSINTS ALCSVDDASI TNVTPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)