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AT5G10760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:22363647 (2012): extracellular region apoplast
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G10760-MONOMEREC:3.4.23.-eggNOG:ENOG410XNV7eggNOG:KOG1339
EMBL:AF083666EMBL:AK226446EMBL:AL365234EMBL:AY072168
EMBL:AY133788EMBL:CP002688EnsemblPlants:AT5G10760EnsemblPlants:AT5G10760.1
entrez:830943Gene3D:2.40.70.10GeneID:830943GO:GO:0004190
GO:GO:0006508GO:GO:0009627GO:GO:0030163GO:GO:0048046
Gramene:AT5G10760.1hmmpanther:PTHR13683hmmpanther:PTHR13683:SF246HOGENOM:HOG000237483
InterPro:IPR001461InterPro:IPR021109InterPro:IPR032799InterPro:IPR032861
InterPro:IPR033121KEGG:ath:AT5G10760MEROPS:A01.A14OMA:CEDAESC
PANTHER:PTHR13683PaxDb:Q8H7H9Pfam:PF14541Pfam:PF14543
Pfscan:PS51767PhylomeDB:Q9LEW3PIR:T50785PROSITE:PS00141
PROSITE:PS51767Proteomes:UP000006548RefSeq:NP_196637.1SMR:Q9LEW3
STRING:3702.AT5G10760.1SUPFAM:SSF50630TAIR:AT5G10760UniGene:At.32338
UniProt:Q9LEW3
Coordinates (TAIR10) chr5:-:3400671..3402165
Molecular Weight (calculated) 49476.10 Da
IEP (calculated) 4.66
GRAVY (calculated) -0.00
Length 464 amino acids
Sequence (TAIR10)
(BLAST)
001: MSIMRNFLSM IIMLCVCLNW CFAEGAEKSD SGKVLDSYTI QVSSLFPSSS SCVPSSKASN TKSSLRVVHM HGACSHLSSD ARVDHDEIIR RDQARVESIY
101: SKLSKNSANE VSEAKSTELP AKSGITLGSG NYIVTIGIGT PKHDLSLVFD TGSDLTWTQC EPCLGSCYSQ KEPKFNPSSS STYQNVSCSS PMCEDAESCS
201: ASNCVYSIVY GDKSFTQGFL AKEKFTLTNS DVLEDVYFGC GENNQGLFDG VAGLLGLGPG KLSLPAQTTT TYNNIFSYCL PSFTSNSTGH LTFGSAGISE
301: SVKFTPISSF PSAFNYGIDI IGISVGDKEL AITPNSFSTE GAIIDSGTVF TRLPTKVYAE LRSVFKEKMS SYKSTSGYGL FDTCYDFTGL DTVTYPTIAF
401: SFAGSTVVEL DGSGISLPIK ISQVCLAFAG NDDLPAIFGN VQQTTLDVVY DVAGGRVGFA PNGC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)