AT3G05650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.665 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 32 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 32 (RLP32); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 35 (TAIR:AT3G11080.1); Has 113074 Blast hits to 30005 proteins in 1111 species: Archae - 53; Bacteria - 9058; Metazoa - 26342; Fungi - 1162; Plants - 67072; Viruses - 12; Other Eukaryotes - 9375 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1645884..1648490 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97308.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.75 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||
| Length | 868 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKDSWNSTSI IPFTFSSLIF FLFTFDFQDV FGVPTKHLCR LEQRDALLEL KKEFKIKKPC FDGLHPTTES WANNSDCCYW DGITCNDKSG EVLELDLSRS 101: CLQSRFHSNS SLFTVLNLRF LTTLDLSYNY FSGQIPSCIE NFSHLTTLDL SKNYFSGGIP SSIGNLSQLT FLDLSGNEFV GEMPFFGNMN QLTNLYVDSN 201: DLTGIFPLSL LNLKHLSDLS LSRNQFTGTL PSNMSSLSNL EYFEAWGNAF TGTLPSSLFT IASLTSINLR NNQLNGTLEF GNISSPSTLT VLDISNNNFI 301: GPIPKSISKF INLQDLDLSH LNTQGPVDFS IFTNLKSLQL LNLSHLNTTT TIDLNALFSS HLNSIYSMDL SGNHVSATTK ISVADHHPTQ LISQLYLSGC 401: GITEFPELLR SQHKMTNLDI SNNKIKGQVP GWLWTLPKLI FVDLSNNIFT GFERSTEHGL SLITKPSMQY LVGSNNNFTG KIPSFICALR SLITLDLSDN 501: NLNGSIPPCM GNLKSTLSFL NLRQNRLGGG LPRSIFKSLR SLDVGHNQLV GKLPRSFIRL SALEVLNVEN NRINDTFPFW LSSLKKLQVL VLRSNAFHGP 601: IHHASFHTLR IINLSHNQFS GTLPANYFVN WNAMSSLMAT EDRSQEKYMG DSFRYYHDSV VLMNKGLEME LVRILKIYTA LDFSENKLEG EIPRSIGLLK 701: ELHVLNLSSN AFTGHIPSSM GNLRELESLD VSQNKLSGEI PQELGNLSYL AYMNFSHNQL GGLVPGGTQF RRQNCSSFKD NPGLYGSSLE EVCLDIHAPA 801: PQQHEPPELE EEDREVFSWI AAAIGFGPGI AFGLTIRYIL VFYKPDWFMH TFGHLQPSAH EKRLRRKQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)