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AT4G24275.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Identified as a screen for stress-responsive genes.
Computational
Description (TAIR10)
unknown protein; Has 11 Blast hits to 11 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J76DeggNOG:ENOG41119QFEMBL:AK229709EMBL:BT006169
EMBL:BT020293EMBL:BT026092EMBL:CP002687EnsemblPlants:AT4G24275
EnsemblPlants:AT4G24275.1entrez:828530GeneID:828530GO:GO:0009414
Gramene:AT4G24275.1hmmpanther:PTHR38386hmmpanther:PTHR38386:SF1HOGENOM:HOG000147072
KEGG:ath:AT4G24275OMA:ERYCRIYProteomes:UP000006548RefSeq:NP_680737.2
TAIR:AT4G24275UniGene:At.44260UniProt:Q84R17
Coordinates (TAIR10) chr4:+:12588579..12588959
Molecular Weight (calculated) 14395.90 Da
IEP (calculated) 9.46
GRAVY (calculated) -1.11
Length 126 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGYSKMDST DQKLEPDHPV VDPQIQKPDL EPAEMKPKLS RNRSVSASAQ AVPSPIKMSM RRSSSVSERY CRIYDQSSAT TWPLPFHEGD EDEDDDDKEK
101: VHKKKKSNNF KKKAFVKACK RFFGIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)