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AT1G07560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 156630 Blast hits to 118524 proteins in 4343 species: Archae - 91; Bacteria - 13045; Metazoa - 42701; Fungi - 9322; Plants - 73192; Viruses - 348; Other Eukaryotes - 17931 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07560-MONOMERBioGrid:22511EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IF1SEMBL:AC022464EMBL:CP002684EMBL:FJ708628
EnsemblPlants:AT1G07560EnsemblPlants:AT1G07560.1entrez:837270Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:837270Genevisible:C0LGD9GO:GO:0004674
GO:GO:0005524GO:GO:0016021Gramene:AT1G07560.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF44HOGENOM:HOG000116550InParanoid:C0LGD9InterPro:IPR000719
InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788InterPro:IPR032675KEGG:ath:AT1G07560
OMA:CTEYASTPaxDb:C0LGD9Pfam:C0LGD9Pfam:PF00069
Pfam:PF12819Pfam:PF13855Pfscan:PS50011PhylomeDB:C0LGD9
PIR:B86210PRIDE:C0LGD9PRO:PR:C0LGD9PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:C0LGD9Proteomes:UP000006548
RefSeq:NP_172236.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:C0LGD9STRING:3702.AT1G07560.1SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT1G07560TMHMM:TMhelixUniGene:At.51517UniProt:C0LGD9
Coordinates (TAIR10) chr1:+:2327320..2331096
Molecular Weight (calculated) 96931.40 Da
IEP (calculated) 6.64
GRAVY (calculated) -0.14
Length 871 amino acids
Sequence (TAIR10)
(BLAST)
001: MKNLRGLLLA FLVLSLGISD FLRAQDQQGF ISLDCGLQAD ESPYTEPLTK LTFTSDADFI KSGKSGKIQN VPGMEYIKPY TVLRYFPDGV RNCYTLIVIQ
101: GTNYLIVAMF TYGNYDNLNT HPKFDLYLGP NIWTTVDLQR NVNGTRAEII HIPRSTSLQI CLVKTGTTTP LISALELRPL RNNTYIPQSG SLKTLFRVHL
201: TDSKETVRYP EDVHDRLWSP FFMPEWRLLR TSLTVNTSDD NGYDIPEDVV VTAATPANVS SPLTISWNLE TPDDLVYAYL HVAEIQSLRE NDTREFNISA
301: GQDVNYGPVS PDEFLVGTLF NTSPVKCEGG TCHLQLIKTP KSTLPPLLNA IEAFITVEFP QSETNANDVL AIKSIETSYG LSRISWQGDP CVPQQLLWDG
401: LTCEYTNMST PPRIHSLDLS SSELTGIIVP EIQNLTELKK LDFSNNNLTG GVPEFLAKMK SLLVINLSGN NLSGSVPQAL LNKVKNGLKL NIQGNPNLCF
501: SSSCNKKKNS IMLPVVASLA SLAAIIAMIA LLFVCIKRRS SSRKGPSPSQ QSIETIKKRY TYAEVLAMTK KFERVLGKGG FGMVYHGYIN GTEEVAVKLL
601: SPSSAQGYKE FKTEVELLLR VYHTNLVSLV GYCDEKDHLA LIYQYMVNGD LKKHFSGSSI ISWVDRLNIA VDAASGLEYL HIGCKPLIVH RDVKSSNILL
701: DDQLQAKLAD FGLSRSFPIG DESHVSTLVA GTFGYLDHEY YQTNRLSEKS DVYSFGVVLL EIITNKPVID HNRDMPHIAE WVKLMLTRGD ISNIMDPKLQ
801: GVYDSGSAWK ALELAMTCVN PSSLKRPNMS HVVHELKECL VSENNRTRDI DTSRSMDINL SFGTDVNPKA R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)