AT1G07560.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 156630 Blast hits to 118524 proteins in 4343 species: Archae - 91; Bacteria - 13045; Metazoa - 42701; Fungi - 9322; Plants - 73192; Viruses - 348; Other Eukaryotes - 17931 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:2327320..2331096 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 96931.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.64 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 871 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKNLRGLLLA FLVLSLGISD FLRAQDQQGF ISLDCGLQAD ESPYTEPLTK LTFTSDADFI KSGKSGKIQN VPGMEYIKPY TVLRYFPDGV RNCYTLIVIQ 101: GTNYLIVAMF TYGNYDNLNT HPKFDLYLGP NIWTTVDLQR NVNGTRAEII HIPRSTSLQI CLVKTGTTTP LISALELRPL RNNTYIPQSG SLKTLFRVHL 201: TDSKETVRYP EDVHDRLWSP FFMPEWRLLR TSLTVNTSDD NGYDIPEDVV VTAATPANVS SPLTISWNLE TPDDLVYAYL HVAEIQSLRE NDTREFNISA 301: GQDVNYGPVS PDEFLVGTLF NTSPVKCEGG TCHLQLIKTP KSTLPPLLNA IEAFITVEFP QSETNANDVL AIKSIETSYG LSRISWQGDP CVPQQLLWDG 401: LTCEYTNMST PPRIHSLDLS SSELTGIIVP EIQNLTELKK LDFSNNNLTG GVPEFLAKMK SLLVINLSGN NLSGSVPQAL LNKVKNGLKL NIQGNPNLCF 501: SSSCNKKKNS IMLPVVASLA SLAAIIAMIA LLFVCIKRRS SSRKGPSPSQ QSIETIKKRY TYAEVLAMTK KFERVLGKGG FGMVYHGYIN GTEEVAVKLL 601: SPSSAQGYKE FKTEVELLLR VYHTNLVSLV GYCDEKDHLA LIYQYMVNGD LKKHFSGSSI ISWVDRLNIA VDAASGLEYL HIGCKPLIVH RDVKSSNILL 701: DDQLQAKLAD FGLSRSFPIG DESHVSTLVA GTFGYLDHEY YQTNRLSEKS DVYSFGVVLL EIITNKPVID HNRDMPHIAE WVKLMLTRGD ISNIMDPKLQ 801: GVYDSGSAWK ALELAMTCVN PSSLKRPNMS HVVHELKECL VSENNRTRDI DTSRSMDINL SFGTDVNPKA R |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)