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AT1G51840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein kinase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51850.1); Has 549 Blast hits to 546 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 549; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G51840EnsemblPlants:AT1G51840.1entrez:841611
GeneID:841611GO:GO:0016301Gramene:AT1G51840.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF44InParanoid:F4IB68InterPro:IPR024788KEGG:ath:AT1G51840
OMA:INPWATIPaxDb:F4IB68Pfam:PF12819PRIDE:F4IB68
ProteinModelPortal:F4IB68Proteomes:UP000006548RefSeq:NP_175596.1STRING:3702.AT1G51840.1
TAIR:AT1G51840UniGene:At.64483UniProt:F4IB68
Coordinates (TAIR10) chr1:-:19249449..19250150
Molecular Weight (calculated) 20394.60 Da
IEP (calculated) 9.07
GRAVY (calculated) -0.09
Length 180 amino acids
Sequence (TAIR10)
(BLAST)
001: MERHCVFVTI FVLILHLVQA QNQTGFISVD CGLSPPESPY NAPQTGLTYT SDTGLINTGK TGRIAKDFEP FVDKPALTMR YFPDGIRNCY NLNVTRDTNY
101: LIKATFVYGN YDGLNVDPNF DLYLGPNLWT TICLVKTGIS IPFINVLELR PLKKNVYATQ SGSLKYLFRM YVSNSSRRIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)