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AT1G51830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51850.1); Has 158754 Blast hits to 122221 proteins in 4579 species: Archae - 99; Bacteria - 13782; Metazoa - 44461; Fungi - 10048; Plants - 71392; Viruses - 389; Other Eukaryotes - 18583 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G51830-MONOMEReggNOG:COG0515eggNOG:ENOG410J9ZBEMBL:AC015448
EMBL:CP002684EnsemblPlants:AT1G51830EnsemblPlants:AT1G51830.1entrez:841610
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:841610GO:GO:0004674
GO:GO:0005524GO:GO:0016021Gramene:AT1G51830.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF44HOGENOM:HOG000116550InterPro:IPR000719InterPro:IPR001611
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788InterPro:IPR032675KEGG:ath:AT1G51830OMA:DISIPPI
Pfam:PF00069Pfam:PF07714Pfam:PF12819Pfam:PF13855
Pfscan:PS50011Pfscan:PS51450PhylomeDB:Q9FZB6PIR:F96557
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450
Proteomes:UP000006548RefSeq:NP_175595.2scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9FZB6STRING:3702.AT1G51830.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT1G51830TMHMM:TMhelixUniGene:At.43966
UniProt:Q9FZB6
Coordinates (TAIR10) chr1:-:19243025..19246010
Molecular Weight (calculated) 76636.50 Da
IEP (calculated) 5.39
GRAVY (calculated) -0.17
Length 693 amino acids
Sequence (TAIR10)
(BLAST)
001: MTVFFINDCV RFPDDVYDRK WYPIFQNSWT QVTTNLNVNI STIYELPQSV MSTAATPLNA NATLNITWTI EPPTTPFYSY IHFAELQSLR ANDTREFNVT
101: LNGEYTIGPY SPKPLKTETI QDLSPEQCNG GACILQLVET LKSTLPPLLN AIEAFTVIDF PQMETNEDDV TGINDVQNTY GLNRISWQGD PCVPKQYSWD
201: GLNCNNSDIS IPPIIISLDL SSSGLNGVIT QGIQNLTHLQ YLDLSDNNLT GDIPKFLADI QSLLVINLSG NNLTGSVPLS LLQKKGLKLN VEGNPHLLCT
301: DGLCVNKGDG HKKKSIIAPV VASIASIAIL IGALVLFFVL KKKTQSKGPP AAYVQASNGR SRRSAEPAIV TKNKRFTYSE VMQMTNNFQR VLGKGGFGIV
401: YHGLVNGTEQ VAIKILSHSS SQGYKQFKAE VELLLRVHHK NLVGLVGYCD EGENLALIYE YMANGDLKEH MSGTRNHFIL NWGTRLKIVV ESAQGLEYLH
501: NGCKPLMVHR DIKTTNILLN EQFDAKLADF GLSRSFPIEG ETHVSTAVAG TPGYLDPEYY RTNWLTEKSD VYSFGVVLLE IITNQPVIDP RREKPHIAEW
601: VGEVLTKGDI KNIMDPSLNG DYDSTSVWKA VELAMCCLNP SSARRPNMSQ VVIELNECLT SENSRGGAIR DMDSEGSIEV SLTFGTEVTP LAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)