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AT2G24940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : membrane-associated progesterone binding protein 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
membrane-associated progesterone binding protein 2 (MAPR2); FUNCTIONS IN: heme binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: membrane steroid binding protein 1 (TAIR:AT5G52240.2); Has 1117 Blast hits to 1108 proteins in 214 species: Archae - 2; Bacteria - 37; Metazoa - 426; Fungi - 339; Plants - 201; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
Protein Annotations
BioGrid:2384eggNOG:ENOG4111UG0eggNOG:KOG1110EMBL:AC006585
EMBL:AY084294EMBL:BT002446EMBL:BT008438EMBL:CP002685
EnsemblPlants:AT2G24940EnsemblPlants:AT2G24940.1entrez:817032EvolutionaryTrace:Q9SK39
Gene3D:3.10.120.10GeneID:817032Genevisible:Q9SK39GO:GO:0005496
GO:GO:0005634GO:GO:0005829GO:GO:0012505GO:GO:0016020
Gramene:AT2G24940.1hmmpanther:PTHR10281HOGENOM:HOG000187840InParanoid:Q9SK39
InterPro:IPR001199iPTMnet:Q9SK39KEGG:ath:AT2G24940KO:K17278
OMA:INTLNDWPaxDb:Q9SK39PDB:1J03PDB:1T0G
PDBsum:1J03PDBsum:1T0GPfam:PF00173Pfam:Q9SK39
PhylomeDB:Q9SK39PIR:C84642PRIDE:Q9SK39PRO:PR:Q9SK39
ProteinModelPortal:Q9SK39Proteomes:UP000006548RefSeq:NP_180066.1SMART:SM01117
SMR:Q9SK39STRING:3702.AT2G24940.1SUPFAM:SSF55856TAIR:AT2G24940
tair10-symbols:AtMAPR2tair10-symbols:MAPR2UniGene:At.44381UniGene:At.75616
UniProt:Q9SK39
Coordinates (TAIR10) chr2:+:10609447..10609749
Molecular Weight (calculated) 11031.80 Da
IEP (calculated) 4.52
GRAVY (calculated) -0.58
Length 100 amino acids
Sequence (TAIR10)
(BLAST)
1: MEFTAEQLSQ YNGTDESKPI YVAIKGRVFD VTTGKSFYGS GGDYSMFAGK DASRALGKMS KNEEDVSPSL EGLTEKEINT LNDWETKFEA KYPVVGRVVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)