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AT1G76200.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 96 Blast hits to 96 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47; Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2FIeggNOG:ENOG410ZNIEEMBL:AC009978EMBL:AK226354
EMBL:AY085964EMBL:BT025697EMBL:CP002684EnsemblPlants:AT1G76200
EnsemblPlants:AT1G76200.1entrez:843953GeneID:843953Genevisible:Q8LDK3
GO:GO:0005747GO:GO:0055114Gramene:AT1G76200.1hmmpanther:PTHR15223
HOGENOM:HOG000070669InParanoid:Q8LDK3IntAct:Q8LDK3InterPro:IPR026627
KEGG:ath:AT1G76200OMA:GKGMCAMPANTHER:PTHR15223PaxDb:Q8LDK3
Pfam:Q8LDK3PhylomeDB:Q8LDK3PRIDE:Q8LDK3PRO:PR:Q8LDK3
Proteomes:UP000006548RefSeq:NP_565128.1STRING:3702.AT1G76200.1TAIR:AT1G76200
UniGene:At.43140UniProt:Q8LDK3
Coordinates (TAIR10) chr1:+:28593351..28593980
Molecular Weight (calculated) 7568.00 Da
IEP (calculated) 9.24
GRAVY (calculated) -0.54
Length 69 amino acids
Sequence (TAIR10)
(BLAST)
1: MGGGGHGGGI TYKGVTVHTP KTWHTVTGKG LCAVMWFWIL YRAKQDGPVV MGWRHPWDGH GDHGHGDHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)