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AT2G26820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.893
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phloem protein 2-A3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phloem protein 2-A3 (PP2-A3); CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G33900.1); Has 7075 Blast hits to 5270 proteins in 530 species: Archae - 11; Bacteria - 693; Metazoa - 2878; Fungi - 405; Plants - 651; Viruses - 87; Other Eukaryotes - 2350 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J77UeggNOG:ENOG410Y715EMBL:AC005168EMBL:CP002685
EnsemblPlants:AT2G26820EnsemblPlants:AT2G26820.1entrez:817223Gene3D:3.40.50.300
GeneID:817223Genevisible:O81025GO:GO:0005525GO:GO:0030246
Gramene:AT2G26820.1hmmpanther:PTHR10903hmmpanther:PTHR10903:SF65HOGENOM:HOG000115747
InParanoid:O81025InterPro:IPR006703InterPro:IPR025886InterPro:IPR027417
KEGG:ath:AT2G26820ncoils:CoilPaxDb:O81025Pfam:O81025
Pfam:PF04548Pfam:PF14299Pfscan:PS51720PhylomeDB:O81025
PIR:T02653PRIDE:O81025PRO:PR:O81025PROSITE:PS51720
ProteinModelPortal:O81025Proteomes:UP000006548RefSeq:NP_180250.1SMR:O81025
STRING:3702.AT2G26820.1SUPFAM:SSF52540TAIR:AT2G26820tair10-symbols:ATPP2-A3
tair10-symbols:PP2-A3UniGene:At.52929UniProt:O81025
Coordinates (TAIR10) chr2:+:11437808..11442199
Molecular Weight (calculated) 52220.50 Da
IEP (calculated) 4.89
GRAVY (calculated) -0.42
Length 463 amino acids
Sequence (TAIR10)
(BLAST)
001: MSEPIKNIVL VGRTGNGKSS TGNTLLGTKQ FKSKNQAKGV TMICEMYRAA IQDGPIINVI DTPGLCDSFV PGDDISNEII NCLTMAEEGI HAVLLVLSAR
101: GRISKEEEST VNTLQCIFGS QILDYCIVVF TGGDDLEEDD QTLDDYFRAG CPEFLTKVLR LCGGRKVLFD NKSKDEKKKV EQVKQLLARV ENVGEQTGGI
201: PYTYQLHRKI KEENDERLRE EERVIESKNR AEAELAEMQQ NLLMEKEKLQ MEEAKNKQLI AQAEANEKLM EQERAKNRAE TELAAVMVEK LQMEEEKNKQ
301: LIAQANRMIC ARDLNIEWSH SEEHWKWVNL DHNISSNTFV EVAELLGVYW FDVSGSLDTT EMAPWTHYEV LFVVNLKDSA FKWNAAVKMN LFYINSRPGG
401: PGTQERAVDM RQHIGKGWVT IHAGEFITTP ENVGLIGFRM SEVDSGDNRG GLIVKGVLIR PIN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)