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AT3G14260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.768
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF567)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53890.1); Has 295 Blast hits to 292 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0CPeggNOG:ENOG410YJE2EMBL:AB022220EMBL:AY600570
EMBL:CP002686EMBL:DQ056592EnsemblPlants:AT3G14260EnsemblPlants:AT3G14260.1
entrez:820646GeneID:820646Gramene:AT3G14260.1hmmpanther:PTHR31087
hmmpanther:PTHR31087:SF25HOGENOM:HOG000238319InParanoid:Q9LUM1InterPro:IPR007612
InterPro:IPR025659KEGG:ath:AT3G14260OMA:CREVYLMPaxDb:Q9LUM1
Pfam:PF04525Pfam:Q9LUM1PhylomeDB:Q9LUM1PRIDE:Q9LUM1
PRO:PR:Q9LUM1ProteinModelPortal:Q9LUM1Proteomes:UP000006548RefSeq:NP_188043.2
SUPFAM:SSF54518TAIR:AT3G14260UniGene:At.50834UniProt:Q9LUM1
Coordinates (TAIR10) chr3:-:4747986..4748779
Molecular Weight (calculated) 26281.40 Da
IEP (calculated) 8.45
GRAVY (calculated) -0.35
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)