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AT4G13310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.948
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily A, polypeptide 20
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily A, polypeptide 20 (CYP71A20); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 19 (TAIR:AT4G13290.1); Has 33816 Blast hits to 33612 proteins in 1682 species: Archae - 67; Bacteria - 3972; Metazoa - 11836; Fungi - 7179; Plants - 9534; Viruses - 3; Other Eukaryotes - 1225 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-379-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AL049608EMBL:AL161536EMBL:BX827756EMBL:CP002687
EnsemblPlants:AT4G13310EnsemblPlants:AT4G13310.1entrez:826961ExpressionAtlas:Q9T0K2
Gene3D:1.10.630.10GeneID:826961Genevisible:Q9T0K2GO:GO:0005506
GO:GO:0009506GO:GO:0016020GO:GO:0016021GO:GO:0016709
GO:GO:0020037GO:GO:0044550gramene_pathway:4.99.1.6gramene_pathway:CAMALEXIN-SYN
gramene_pathway:PWY-581gramene_plant_reactome:1119486gramene_plant_reactome:6873515hmmpanther:PTHR24298
hmmpanther:PTHR24298:SF182HOGENOM:HOG000218629InParanoid:Q9T0K2InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT4G13310KO:K00517
OMA:HDERWPRPaxDb:Q9T0K2Pfam:PF00067Pfam:Q9T0K2
PhylomeDB:Q9T0K2PIR:T06288PRIDE:Q9T0K2PRINTS:PR00385
PRINTS:PR00463PRO:PR:Q9T0K2PROSITE:PS00086ProteinModelPortal:Q9T0K2
Proteomes:UP000006548RefSeq:NP_193067.3scanprosite:PS00086SMR:Q9T0K2
STRING:3702.AT4G13310.1SUPFAM:SSF48264TAIR:AT4G13310tair10-symbols:CYP71A20
UniGene:At.33390UniProt:Q9T0K2
Coordinates (TAIR10) chr4:+:7750453..7753049
Molecular Weight (calculated) 56501.20 Da
IEP (calculated) 9.41
GRAVY (calculated) -0.15
Length 497 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMILITLCL TTLLALLLKS ILKRTATKNF NLPPSPWRLP VIGNLHQLSL HTHRSLRSLS LRYGPLMLLH FGRTPVLIVS SADVAHDVMK THDLVCANRP
101: KTKVVDKILS GGRDVAFAPY GEYWRQMKSI CIQNLLNNKM VRSYEKIREE EIKRMIEKLE KASCSSSPSP VNLSQILMTL TNDIICRVAL GRKYSGKKDG
201: IDVENIVRTF AALLGEFPVG EYIPSLSWID RIRGLDHKME VVDKRFDEFL ERVVKEHEEA DKETRSDLVD KLLTIQSDKT GQFELEKSAL KLIIWDMFLA
301: GTATTLSFLE WAMTELMRNP KVMKKLQEEI RSSSPQDLFV TEKEAEKMNY LQAVIKEALR LRPPAPLLVP RVLSEDVKLK GYNIPAGTQV IVNAWAIQRD
401: TTTWGTDAEE FKPERHLDTN LDFQGQDFKF IPFGSGKRIC PGIGFTSALI GVTLANIVKR FNWRMDVEPQ RVQHDLTEAT GLVVFRKFPL IAIPSSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)