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AT1G10850.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G60630.1); Has 141918 Blast hits to 107530 proteins in 3087 species: Archae - 92; Bacteria - 12469; Metazoa - 36374; Fungi - 8455; Plants - 68016; Viruses - 276; Other Eukaryotes - 16236 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G10850-MONOMEReggNOG:ENOG410II01eggNOG:ENOG410YEDCEMBL:AK176826
EMBL:AY056128EMBL:CP002684EnsemblPlants:AT1G10850EnsemblPlants:AT1G10850.1
entrez:3766694Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:3766694
GO:GO:0004672GO:GO:0005524GO:GO:0016021Gramene:AT1G10850.1
hmmpanther:PTHR27008hmmpanther:PTHR27008:SF40InterPro:IPR000719InterPro:IPR001611
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR032675
KEGG:ath:AT1G10850OMA:GVAEMYSPfam:PF00069Pfam:PF08263
Pfam:PF13855Pfscan:PS50011PhylomeDB:Q940B9PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_001077512.4SMR:Q940B9STRING:3702.AT1G10850.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G10850TMHMM:TMhelix
UniGene:At.16752UniGene:At.64974UniProt:Q940B9
Coordinates (TAIR10) chr1:+:3612228..3614343
Molecular Weight (calculated) 72741.50 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.25
Length 663 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)