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AT1G80280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.972
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7676 Blast hits to 7658 proteins in 1204 species: Archae - 71; Bacteria - 5735; Metazoa - 276; Fungi - 71; Plants - 550; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0596eggNOG:KOG1454EMBL:AC018848EMBL:AY099691
EMBL:BT000273EMBL:CP002684EnsemblPlants:AT1G80280EnsemblPlants:AT1G80280.1
entrez:844368ESTHER:arath-F5I6.3Gene3D:3.40.50.1820GeneID:844368
GO:GO:0016021GO:GO:0016787Gramene:AT1G80280.1hmmpanther:PTHR10992
hmmpanther:PTHR10992:SF898HOGENOM:HOG000005844InterPro:IPR000073InterPro:IPR029058
KEGG:ath:AT1G80280OMA:CREDGINPfam:PF12697PhylomeDB:Q9C976
PIR:C96834Proteomes:UP000006548RefSeq:NP_178144.1SMR:Q9C976
STRING:3702.AT1G80280.1SUPFAM:SSF53474TAIR:AT1G80280TMHMM:TMhelix
UniGene:At.18173UniGene:At.72982UniProt:Q9C976
Coordinates (TAIR10) chr1:-:30183839..30186141
Molecular Weight (calculated) 71110.00 Da
IEP (calculated) 9.06
GRAVY (calculated) 0.13
Length 647 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKGWFMVEK ARRCLRTVFF MVAMLVSLLV SSLPVLVAIG DVLVPTFLLS SFTCLTCYGF KEHLSRYAFK SSLTDIPLVS LVRSFLVICV YSLSDAPALS
101: HGPYLGTVSL CSVVSVVLLS VKACVFTANS QLNDQASSSP SRQRLHLKKS WGMPVLFLSS VVFALGHMVV AYRTSCRARR KLLYHRVDPE AVLSCKSVFS
201: GYQKVPRSPI PLVGKASKVD GEARRKLHPS VSNDDGELPA RLLADLDSLF ITVRGLTVHY KICTPASPRH SISSSVEANS MLNMPEAMVG RLKLDRNILS
301: MVTRNKLNHH HHRSYSSLFN NSSSLHDPLL DGLPTSPRLF KDIQEESCRE DGINVSNFGA TEQQDVGGNG QFGVVLVHGF GGGVFSWRHV MSSLAHQLGC
401: VVTAFDRPGW GLTARPHKKD LEEREMPNPY TLDNQVDMLL AFCHEMGFAS VVLVGHDDGG LLALKAAQRL LETKDPIKVK GVVLLNVSLT REVVPAFARI
501: LLHTSLGKKH LVRPLLRTEI AQVVNRRAWY DPAKMTTDVL RLYKAPLHVE GWDEALHEIG RLSSEMVLPT QNALSLLKAV ENLPVLVVAG AEDALVPLKS
601: SQVMASKLEN SRLVAISGCG HLPHEECPKA LLAAMCPFIS RLVFSED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)