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AT5G67200.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 14506206
AmiGO : plasma membrane 17317660
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 14506206
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G50230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G67200-MONOMEReggNOG:COG0515eggNOG:ENOG410IVAKEMBL:AB020742
EMBL:AY059897EMBL:BT003370EMBL:CP002688EnsemblPlants:AT5G67200
EnsemblPlants:AT5G67200.1entrez:836855Gene3D:3.80.10.10GeneID:836855
Genevisible:Q93Y06GO:GO:0004672GO:GO:0005524GO:GO:0005886
GO:GO:0016021Gramene:AT5G67200.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF1
HOGENOM:HOG000116554InParanoid:Q93Y06InterPro:IPR000719InterPro:IPR001611
InterPro:IPR011009InterPro:IPR032675iPTMnet:Q93Y06KEGG:ath:AT5G67200
ncoils:CoilOMA:NERFDYCPaxDb:Q93Y06Pfam:PF00069
Pfam:PF13855Pfam:Q93Y06Pfscan:PS50011PhylomeDB:Q93Y06
PRIDE:Q93Y06PRO:PR:Q93Y06PROSITE:PS50011ProteinModelPortal:Q93Y06
Proteomes:UP000006548RefSeq:NP_569046.1SMR:Q93Y06STRING:3702.AT5G67200.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G67200TMHMM:TMhelix
UniGene:At.9613UniProt:Q93Y06
Coordinates (TAIR10) chr5:-:26813893..26816555
Molecular Weight (calculated) 74010.40 Da
IEP (calculated) 8.02
GRAVY (calculated) -0.20
Length 669 amino acids
Sequence (TAIR10)
(BLAST)
001: MTLNFFLPFF FFFILLRVSA GAEPNYFNSL LPSDAVALLS FKSTADLDNK LLYSLTERYD YCQWRGVKCA QGRIVRLVLS GVGLRGYFSS ATLSRLDQLR
101: VLSLENNSLF GPIPDLSHLV NLKSLFLSRN QFSGAFPPSI LSLHRLMILS ISHNNFSGSI PSEINALDRL TSLNLDFNRF NGTLPSLNQS FLTSFNVSGN
201: NLTGVIPVTP TLSRFDASSF RSNPGLCGEI INRACASRSP FFGSTNKTTS SEAPLGQSAQ AQNGGAVVIP PVVTKKKGKE SGLVLGFTAG LASLIVLGLC
301: LVVFSLVIKK RNDDGIYEPN PKGEASLSQQ QQSQNQTPRT RAVPVLNSDT ESQKREKEVQ FQETEQRIPN SGNLVFCGES RSQGMYTMEQ LMRASAELLG
401: RGSVGITYKA VLDNQLIVTV KRLDAAKTAV TSEEAFENHM EIVGGLRHTN LVPIRSYFQS NGERLIIYDY HPNGSLFNLI HGSRSSRAKP LHWTSCLKIA
501: EDVAQGLYYI HQTSSALVHG NLKSTNILLG QDFEACLTDY CLSVLTDSSS ASPDDPDSSS YKAPEIRKSS RRPTSKCDVY SFGVLIFELL TGKNASRHPF
601: MAPHDMLDWV RAMREEEEGT EDNRLGMMTE TACLCRVTSP EQRPTMRQVI KMIQEIKESV MAEENDPFR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)