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AT4G21380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21533090 (2011): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14760709 (2004): plant-type vacuole
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor kinase 3
Curator
Summary (TAIR10)
encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.
Computational
Description (TAIR10)
receptor kinase 3 (RK3); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 120297 Blast hits to 118488 proteins in 4631 species: Archae - 97; Bacteria - 13304; Metazoa - 44101; Fungi - 10092; Plants - 34714; Viruses - 410; Other Eukaryotes - 17579 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G21380-MONOMERBioGrid:13181EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IVATEMBL:AK118895EMBL:AL031187EMBL:AL161555
EMBL:BT006032EMBL:CP002687EMBL:EF182720EMBL:EF637083
EMBL:GU723792EMBL:GU723793EMBL:GU723794EMBL:GU723795
EMBL:GU723796EMBL:GU723797EMBL:GU723798EMBL:GU723799
EMBL:GU723800EMBL:GU723801EMBL:GU723802EMBL:GU723803
EMBL:GU723804EMBL:GU723805EMBL:GU723806EMBL:GU723807
EMBL:GU723808EMBL:GU723809EMBL:GU723810EMBL:GU723811
EMBL:GU723812EMBL:GU723813EMBL:GU723814EMBL:GU723815
EMBL:GU723816EMBL:GU723817EMBL:GU723818EMBL:GU723819
EMBL:GU723820EMBL:GU723821EMBL:GU723822EMBL:GU723823
EMBL:GU723824EMBL:GU723825EMBL:GU723826EMBL:GU723827
EMBL:GU723828EMBL:GU723829EMBL:GU723830EMBL:GU723831
EMBL:GU723832EMBL:GU723833EMBL:GU723834EMBL:GU723835
EMBL:GU723836EMBL:GU723837EMBL:GU723838EMBL:GU723839
EMBL:GU723840EMBL:GU723841EMBL:GU723842EMBL:GU723843
EMBL:GU723844EMBL:GU723845EMBL:GU723846EMBL:GU723847
EMBL:GU723848EMBL:GU723849EMBL:GU723850EMBL:GU723851
EMBL:GU723852EMBL:GU723853EMBL:GU723854EMBL:GU723855
EMBL:GU723856EMBL:GU723857EMBL:GU723858EMBL:GU723859
EMBL:GU723860EMBL:GU723861EMBL:GU723862EMBL:GU723863
EMBL:GU723864EMBL:GU723865EnsemblPlants:AT4G21380EnsemblPlants:AT4G21380.1
entrez:827890Gene3D:2.60.120.200Gene3D:2.90.10.10GeneID:827890
Genevisible:O81905GO:GO:0004674GO:GO:0004675GO:GO:0005524
GO:GO:0005773GO:GO:0005886GO:GO:0006468GO:GO:0006952
GO:GO:0007178GO:GO:0009506GO:GO:0016021GO:GO:0030246
GO:GO:0031625GO:GO:0048544Gramene:AT4G21380.1hmmpanther:PTHR27002
hmmpanther:PTHR27002:SF93InParanoid:O81905IntAct:O81905InterPro:IPR000719
InterPro:IPR000858InterPro:IPR001245InterPro:IPR001480InterPro:IPR003609
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR021820InterPro:IPR022126InterPro:IPR024171KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1KEGG:ath:AT4G21380OMA:CSIFDSAPaxDb:O81905
Pfam:O81905Pfam:PF00954Pfam:PF01453Pfam:PF07714
Pfam:PF08276Pfam:PF11883Pfam:PF12398Pfscan:PS50011
Pfscan:PS50927Pfscan:PS50948PhylomeDB:O81905PIR:T05180
PIRSF:PIRSF000641PRIDE:O81905PRO:PR:O81905PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011PROSITE:PS50927PROSITE:PS50948
ProteinModelPortal:O81905Proteomes:UP000006548RefSeq:NP_193869.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00108SMART:SM00220SMART:SM00473
SMR:O81905STRING:3702.AT4G21380.1SUPFAM:SSF51110SUPFAM:SSF56112
TAIR:AT4G21380tair10-symbols:ARK3tair10-symbols:RK3TMHMM:TMhelix
UniGene:At.32634UniProt:O81905
Coordinates (TAIR10) chr4:-:11389219..11393090
Molecular Weight (calculated) 96471.10 Da
IEP (calculated) 7.67
GRAVY (calculated) -0.29
Length 850 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGLPNFYHS YTFFFFFLLI LFPAYSISAN TLSASESLTI SSNNTIVSPG NVFELGFFKP GLDSRWYLGI WYKAISKRTY VWVANRDTPL SSSIGTLKIS
101: DSNLVVLDQS DTPVWSTNLT GGDVRSPLVA ELLDNGNFVL RDSKNSAPDG VLWQSFDFPT DTLLPEMKLG WDAKTGFNRF IRSWKSPDDP SSGDFSFKLE
201: TEGFPEIFLW NRESRMYRSG PWNGIRFSGV PEMQPFEYMV FNFTTSKEEV TYSFRITKSD VYSRLSISSS GLLQRFTWIE TAQNWNQFWY APKDQCDEYK
301: ECGVYGYCDS NTSPVCNCIK GFKPRNPQVW GLRDGSDGCV RKTLLSCGGG DGFVRLKKMK LPDTTTASVD RGIGVKECEQ KCLRDCNCTA FANTDIRGSG
401: SGCVTWTGEL FDIRNYAKGG QDLYVRLAAT DLEDKRNRSA KIIGSSIGVS VLLLLSFIIF FLWKRKQKRS ILIETPIVDH QLRSRDLLMN EVVISSRRHI
501: SRENNTDDLE LPLMEFEEVA MATNNFSNAN KLGQGGFGIV YKGKLLDGQE MAVKRLSKTS VQGTDEFKNE VKLIARLQHI NLVRLLACCV DAGEKMLIYE
601: YLENLSLDSH LFDKSRNSKL NWQMRFDIIN GIARGLLYLH QDSRFRIIHR DLKASNILLD KYMTPKISDF GMARIFGRDE TEANTRKVVG TYGYMSPEYA
701: MDGIFSMKSD VFSFGVLLLE IISSKRNKGF YNSDRDLNLL GCVWRNWKEG KGLEIIDPII TDSSSTFRQH EILRCIQIGL LCVQERAEDR PTMSLVILML
801: GSESTTIPQP KAPGYCLERS LLDTDSSSSK QRDDESWTVN QITVSVLDAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)