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AT4G23130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 5
Curator
Summary (TAIR10)
Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 5 (CRK5); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response to bacterium, programmed cell death, response to salicylic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 4 (TAIR:AT3G45860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23130-MONOMERBioCyc:ARA:GQT-1605-MONOMERBioGrid:13701EC:2.7.11.-
eggNOG:COG0515eggNOG:ENOG410J9NTEMBL:AF224707EMBL:AL022347
EMBL:AL031018EMBL:AL161558EMBL:AY142496EMBL:CP002687
EnsemblPlants:AT4G23130EnsemblPlants:AT4G23130.1entrez:828412Gene3D:2.60.120.200
GeneID:828412Genevisible:Q9C5S8GO:GO:0004674GO:GO:0005524
GO:GO:0005886GO:GO:0006468GO:GO:0006952GO:GO:0009506
GO:GO:0009751GO:GO:0012501GO:GO:0016021GO:GO:0042742
hmmpanther:PTHR27002HOGENOM:HOG000116550InParanoid:Q9C5S8InterPro:IPR000719
InterPro:IPR001245InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT4G23130OMA:CTNRISR
PaxDb:Q9C5S8Pfam:PF01657Pfam:PF07714Pfam:Q9C5S8
Pfscan:PS50011Pfscan:PS51473PhylomeDB:Q9C5S8PIR:T04830
PRIDE:Q9C5S8PRO:PR:Q9C5S8PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011PROSITE:PS51473ProteinModelPortal:Q9C5S8Proteomes:UP000006548
RefSeq:NP_567677.1RefSeq:NP_849425.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9C5S8STRING:3702.AT4G23130.2SUPFAM:SSF56112
TAIR:AT4G23130tair10-symbols:CRK5tair10-symbols:RLK6TMHMM:TMhelix
UniGene:At.2193UniProt:Q9C5S8
Coordinates (TAIR10) chr4:-:12117688..12120134
Molecular Weight (calculated) 73406.00 Da
IEP (calculated) 7.72
GRAVY (calculated) -0.08
Length 659 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAYTSLNFL FLLTFFIGSL RVSAQLQDPT YVGHVCTNRI SRNSIYFSNL QTLLTSLSSN NAYFSLGSHS LTKGQNSDMV FGLYLCKGDL SPESCRECVI
101: FAAKDTRSRC PGGKEFLIQY DECMLGYSDR NIFMDTVTTT TIITWNTQKV TADQSDRFND AVLSLMKKSA EEAANSTSKK FAVKKSDFSS SQSLYASVQC
201: IPDLTSEDCV MCLQQSIKEL YFNKVGGRFL VPSCNSRYEV YPFYKETIEG TVLPPPVSAP PLPLVSTPSF PPGKGKNSTV IIIAIVVPVA ISVLICVAVF
301: SFHASKRAKK TYDTPEEDDI TTAGSLQFDF KVIEAATDKF SMCNKLGQGG FGQVYKGTLP NGVQVAVKRL SKTSGQGEKE FKNEVVVVAK LQHRNLVKLL
401: GFCLEREEKI LVYEFVSNKS LDYFLFDSRM QSQLDWTTRY KIIGGIARGI LYLHQDSRLT IIHRDLKAGN ILLDADMNPK VADFGMARIF EIDQTEAHTR
501: RVVGTYGYMS PEYAMYGQFS MKSDVYSFGV LVLEIISGRK NSSLYQMDAS FGNLVTYTWR LWSDGSPLDL VDSSFRDSYQ RNEIIRCIHI ALLCVQEDTE
601: NRPTMSAIVQ MLTTSSIALA VPQPPGFFFR SNHEQAGPSM DKSSLCSIDA ASITILAPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)