AT4G11890.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: kinases;protein kinases (TAIR:AT4G23250.1); Has 112459 Blast hits to 111251 proteins in 4065 species: Archae - 88; Bacteria - 13418; Metazoa - 41055; Fungi - 9473; Plants - 32228; Viruses - 287; Other Eukaryotes - 15910 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:7148269..7149772 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 40233.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 351 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAVTSLLDTV FRRRKKKSTE FISFFEFDLD TIKAATNDFS ELVGRGGFGF VYKGRLQNGQ EIAVKILSTS SIRTERQFHN ELIILSKLKH KNLINLLGFC 101: TKRDQHGLVY EFMPNSSLDC FILDPHRAAQ LNWEMCRNII DGIARGLRYL HEESGLWVVH RDIKPGNILL DSDLKPKIVG FELARTMQQG ENAAETTEIV 201: GTVGYLDPEY IRSGRVSVKS DVYAFGVTIL TIISRRKAWS VDGDSLIKYV RRCWNRGEAI DVIHEVMREE EREYSISEIL RYIHIALLCV DENAERRPNI 301: DKVLHWFSCF STPLPDPTFG NRFLVEEETN WPWSPSLSPG HSSVTSPISS R |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)