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AT3G21340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51850.1); Has 160620 Blast hits to 122303 proteins in 4467 species: Archae - 99; Bacteria - 13621; Metazoa - 44084; Fungi - 10001; Plants - 73653; Viruses - 414; Other Eukaryotes - 18748 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G21340-MONOMERBioGrid:7020EC:2.7.10.1EC:2.7.11.1
eggNOG:COG0515eggNOG:ENOG410J721EMBL:AP001305EMBL:CP002686
EMBL:FJ708725EnsemblPlants:AT3G21340EnsemblPlants:AT3G21340.1entrez:821688
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:821688Genevisible:Q9LIG2
GO:GO:0004674GO:GO:0004714GO:GO:0005524GO:GO:0005886
GO:GO:0016021Gramene:AT3G21340.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44
HOGENOM:HOG000116550InParanoid:Q9LIG2IntAct:Q9LIG2InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR024788InterPro:IPR032675
iPTMnet:Q9LIG2KEGG:ath:AT3G21340OMA:ATETIFYPaxDb:Q9LIG2
Pfam:PF07714Pfam:PF12819Pfam:PF13855Pfam:Q9LIG2
Pfscan:PS50011PhylomeDB:Q9LIG2PRIDE:Q9LIG2PRO:PR:Q9LIG2
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9LIG2
Proteomes:UP000006548RefSeq:NP_188771.2scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9LIG2STRING:3702.AT3G21340.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT3G21340TMHMM:TMhelixUniGene:At.38075
UniProt:Q9LIG2
Coordinates (TAIR10) chr3:-:7511848..7515937
Molecular Weight (calculated) 100200.00 Da
IEP (calculated) 6.37
GRAVY (calculated) -0.22
Length 899 amino acids
Sequence (TAIR10)
(BLAST)
001: MEYHPQAIRL CALIFISFYA LLHLVEAQDQ KGFISLDCGS LPNEPPYNDP STGLTYSTDD GFVQSGKTGR IQKAFESIFS KPSLKLRYFP DGFRNCYTLN
101: VTQDTNYLIK AVFVYGNYDG LNNPPSFDLY LGPNLWVTVD MNGRTNGTIQ EIIHKTISKS LQVCLVKTGT SSPMINTLEL RPLKNNTYNT QSGSLKYFFR
201: YYFSGSGQNI RYPDDVNDRK WYPFFDAKEW TELTTNLNIN SSNGYAPPEV VMASASTPIS TFGTWNFSWL LPSSTTQFYV YMHFAEIQTL RSLDTREFKV
301: TLNGKLAYER YSPKTLATET IFYSTPQQCE DGTCLLELTK TPKSTLPPLM NALEVFTVID FPQMETNPDD VAAIKSIQST YGLSKISWQG DPCVPKQFLW
401: EGLNCNNLDN STPPIVTSLN LSSSHLTGII AQGIQNLTHL QELDLSNNNL TGGIPEFLAD IKSLLVINLS GNNFNGSIPQ ILLQKKGLKL ILEGNANLIC
501: PDGLCVNKAG NGGAKKMNVV IPIVASVAFV VVLGSALAFF FIFKKKKTSN SQDLGPSSYT QVSEVRTIRS SESAIMTKNR RFTYSEVVTM TNNFERVLGK
601: GGFGMVYHGT VNNTEQVAVK MLSHSSSQGY KEFKAEVELL LRVHHKNLVG LVGYCDEGEN LALIYEYMAN GDLREHMSGK RGGSILNWET RLKIVVESAQ
701: GLEYLHNGCK PPMVHRDVKT TNILLNEHLH AKLADFGLSR SFPIEGETHV STVVAGTPGY LDPEYYRTNW LNEKSDVYSF GIVLLEIITN QLVINQSREK
801: PHIAEWVGLM LTKGDIQNIM DPKLYGDYDS GSVWRAVELA MSCLNPSSAR RPTMSQVVIE LNECLSYENA RGGTSQNMNS ESSIEVSMNF DIGATPDAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)