AT1G21560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1); Has 76 Blast hits to 76 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 2; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:7555430..7556789 | ||||||||||||||||||||
| Molecular Weight (calculated) | 38136.70 Da | ||||||||||||||||||||
| IEP (calculated) | 6.89 | ||||||||||||||||||||
| GRAVY (calculated) | -0.93 | ||||||||||||||||||||
| Length | 325 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDYQYIKLLD SFREDGSLNL SDNPLRSIRY EVDNGGYDKR EFKAVFTNKR SREDRNTIRV TKKNVEPKPP HVQASTEKVT KEAGFKLRRR ESLVSQKSVE 101: AMLITSHVRR NSQHNNGDAS EKENFEDDIV LDEVYRSYLK RLVENSKSSR TNPEKEIKVK CEEDHTVSLS DSDSDIIVVG DCPFLEEEDS PFVPSKSYKV 201: IDLDEESSDQ RNSWFRREIM NVLKQPYTVT ELKELHKEAS VHGVSSRHIE LRDGTEFSFP TNKKKPSYLD RYPDFKKQYL DSLREKDERK ALNLLRGFIF 301: YITNVVRDDA FKPWLDQECL KIRCV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)