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AT2G01210.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 14506206
AmiGO : plasma membrane 15060130
AmiGO : plasma membrane 17317660
AmiGO : plastid 18431481
AmiGO : plastid 18633119
TAIR : plastid 18633119
TAIR : plasma membrane 14506206
TAIR : plastid 18431481
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31541795 (2020): plasma membrane
  • PMID:30875866 (2019): plasma membrane
  • PMID:30865669 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28443122 (2017): plasma membrane
  • PMID:24872594 (2014): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:20843791 (2010): plasma membrane
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:17317660 (2007): plasma membrane
  • PMID:16287169 (2006): extracellular region
  • PMID:15308754 (2004): plasma membrane
  • PMID:15060130 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G01210-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IKCA
EMBL:AC006200EMBL:CP002685EMBL:FJ708685EnsemblPlants:AT2G01210
EnsemblPlants:AT2G01210.1entrez:814649Gene3D:3.80.10.10GeneID:814649
GO:GO:0004672GO:GO:0005524GO:GO:0005886GO:GO:0009505
GO:GO:0009507GO:GO:0009570GO:GO:0016021Gramene:AT2G01210.1
hmmpanther:PTHR27008hmmpanther:PTHR27008:SF11HOGENOM:HOG000116554InterPro:IPR000719
InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT2G01210OMA:CFRKDES
Pfam:PF00069Pfam:PF00560Pfam:PF08263Pfscan:PS50011
PhylomeDB:Q9ZU46PIR:H84421PROSITE:PS00108PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_178230.1scanprosite:PS00108SMART:SM00220
SMART:SM00369SMR:Q9ZU46STRING:3702.AT2G01210.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT2G01210UniGene:At.50061UniProt:Q9ZU46
Coordinates (TAIR10) chr2:-:119509..121734
Molecular Weight (calculated) 78311.70 Da
IEP (calculated) 6.01
GRAVY (calculated) -0.12
Length 716 amino acids
Sequence (TAIR10)
(BLAST)
001: MLASLIIFVA LLCNVTVISG LNDEGFALLT FKQSVHDDPT GSLNNWNSSD ENACSWNGVT CKELRVVSLS IPRKNLYGSL PSSLGFLSSL RHLNLRSNRF
101: YGSLPIQLFH LQGLQSLVLY GNSFDGSLSE EIGKLKLLQT LDLSQNLFNG SLPLSILQCN RLKTLDVSRN NLSGPLPDGF GSAFVSLEKL DLAFNQFNGS
201: IPSDIGNLSN LQGTADFSHN HFTGSIPPAL GDLPEKVYID LTFNNLSGPI PQTGALMNRG PTAFIGNTGL CGPPLKDLCQ GYQLGLNASY PFIPSNNPPE
301: DSDSTNSETK QKSSGLSKSA VIAIVLCDVF GICLVGLLFT YCYSKFCACN RENQFGVEKE SKKRASECLC FRKDESETPS ENVEHCDIVP LDAQVAFNLE
401: ELLKASAFVL GKSGIGIVYK VVLENGLTLA VRRLGEGGSQ RFKEFQTEVE AIGKLKHPNI ASLRAYYWSV DEKLLIYDYV SNGNLATALH GKPGMMTIAP
501: LTWSERLRIM KGIATGLVYL HEFSPKKYVH GDLKPSNILI GQDMEPKISD FGLARLANIA GGSSPTIQSN RIIQTDQQPQ ERQQHHHKSV SSEFTAHSSS
601: GSYYQAPETL KMVKPSQKWD VYSYGIILLE LIAGRSPAVE VGTSEMDLVR WVQVCIEEKK PLCDVLDPCL APEAETEDEI VAVLKIAISC VNSSPEKRPT
701: MRHVSDTLDR LPVAGD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)