AT1G30600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G44530.1); Has 8563 Blast hits to 7609 proteins in 1287 species: Archae - 221; Bacteria - 5215; Metazoa - 42; Fungi - 570; Plants - 1830; Viruses - 0; Other Eukaryotes - 685 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:10841341..10844906 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88550.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.64 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.11 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 832 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDESSLVRFV FLLCLVSSSV FCLAESDQNA TVSSAVYIVT LKDRPSVHFS GRESSDSKHS LTATSSQIYR TLNRSASIIR VHDSLLRNVL RKENYLKLYS 101: YHYLINGFSA VLTRKQADRL AAREEVENVV LDFLVEKATT HTPQFLGLPR GAWLRDGGSE YAGEGVVIGF IDTGIDPTHP SFSDKISGHT YSVPPHFTGV 201: CEVTIGFPPG SCNRKLIGAR HFAESALSRG VLNSSQDDAS PFDGEGHGTH TASVAAGNHG IPVVVAGHRL GNASGMAPRA HIAIYKALYK RFGGFAADII 301: AAIDQAAQDG VDIINLSITP NRRPPGIATF FNPIDMALLS AVKAGIFVVQ AAGNTGPAPK SMSSFSPWIF TVGATSHDRV YSNSIILGNN VTIPGVGLAS 401: GTRIMHKLVL ATHALRNGTT VMDAIYVGEC QDSSSFDQKL VQGKILVCSY TVRFILGVST IKQALLTAKN LTAAGLVFYI DPSATGFQMT SSPMDIPGIL 501: ISSPQDSQAL LRYYNSSLLR ENGSGKIVGS ASVAKIVGGM RPTYGITAPK VMYFSARGPD PEDDSFVDAD IMKPNLVAPG NAIWGAWSPL GIGTNDFQGE 601: RFAMESGTSM SAPHVTGIAA LIKQKFPHFT PAAIASALST TASLSDRKGE HIMAQRTVLN PDISQSPATP FDMGSGFVNA TAALDPGLIF DIGYNEYMKF 701: LCGINGSSPV VLNYTGESCS SYNSSLAASD LNLPSVTIAK LVGTRAVLRW VTNIATTATN ETYIVGWMAP DSVSVKVSPA KFTIGNGQTR VLSLVFRAMK 801: NVSMASFGRI GLFGDRGHVV NIPVAVIYKI AV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)