AT3G24660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : transmembrane kinase-like 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Receptor kinase-like protein family | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
transmembrane kinase-like 1 (TMKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 102882 Blast hits to 72978 proteins in 2721 species: Archae - 76; Bacteria - 8021; Metazoa - 22133; Fungi - 3923; Plants - 58593; Viruses - 201; Other Eukaryotes - 9935 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9003641..9005751 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73357.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 674 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGMEALRFLH VIFFFVLILH CHCGTSLSGS SDVKLLLGKI KSSLQGNSES LLLSSWNSSV PVCQWRGVKW VFSNGSPLQC SDLSSPQWTN TSLFNDSSLH 101: LLSLQLPSAN LTGSLPREIG EFSMLQSVFL NINSLSGSIP LELGYTSSLS DVDLSGNALA GVLPPSIWNL CDKLVSFKIH GNNLSGVLPE PALPNSTCGN 201: LQVLDLGGNK FSGEFPEFIT RFKGVKSLDL SSNVFEGLVP EGLGVLELES LNLSHNNFSG MLPDFGESKF GAESFEGNSP SLCGLPLKPC LGSSRLSPGA 301: VAGLVIGLMS GAVVVASLLI GYLQNKKRKS SIESEDDLEE GDEEDEIGEK EGGEGKLVVF QGGENLTLDD VLNATGQVME KTSYGTVYKA KLSDGGNIAL 401: RLLREGTCKD RSSCLPVIRQ LGRIRHENLV PLRAFYQGKR GEKLLIYDYL PNISLHDLLH ESKPRKPALN WARRHKIALG IARGLAYLHT GQEVPIIHGN 501: IRSKNVLVDD FFFARLTEFG LDKIMVQAVA DEIVSQAKSD GYKAPELHKM KKCNPRSDVY AFGILLLEIL MGKKPGKSGR NGNEFVDLPS LVKAAVLEET 601: TMEVFDLEAM KGIRSPMEEG LVHALKLAMG CCAPVTTVRP SMEEVVKQLE ENRPRNRSAL YSPTETRSDA ETPF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)