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AT1G34110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.939
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 229810 Blast hits to 121355 proteins in 3638 species: Archae - 147; Bacteria - 18757; Metazoa - 70622; Fungi - 9447; Plants - 104379; Viruses - 381; Other Eukaryotes - 26077 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G34110-MONOMERBioGrid:25542EC:2.7.11.1eggNOG:COG4886
eggNOG:ENOG410IF73EMBL:AC015446EMBL:CP002684EMBL:FJ708644
EnsemblPlants:AT1G34110EnsemblPlants:AT1G34110.1entrez:840310Gene3D:3.80.10.10
GeneID:840310Genevisible:C0LGF5GO:GO:0004674GO:GO:0005524
GO:GO:0016021Gramene:AT1G34110.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF33
HOGENOM:HOG000116551InParanoid:C0LGF5InterPro:IPR000719InterPro:IPR001611
InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210
InterPro:IPR017441InterPro:IPR032675KEGG:ath:AT1G34110OMA:CKNHTAS
PaxDb:C0LGF5Pfam:C0LGF5Pfam:PF00069Pfam:PF00560
Pfam:PF08263Pfam:PF13855Pfscan:PS50011Pfscan:PS51450
PhylomeDB:C0LGF5PIR:B86465PRIDE:C0LGF5PRO:PR:C0LGF5
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450
ProteinModelPortal:C0LGF5Proteomes:UP000006548RefSeq:NP_174673.3scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMART:SM00369STRING:3702.AT1G34110.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G34110TMHMM:TMhelix
UniGene:At.16189UniGene:At.64854UniProt:C0LGF5
Coordinates (TAIR10) chr1:-:12417331..12421246
Molecular Weight (calculated) 116732.00 Da
IEP (calculated) 6.17
GRAVY (calculated) 0.05
Length 1072 amino acids
Sequence (TAIR10)
(BLAST)
0001: MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
0101: TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
0201: GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
0301: PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
0401: GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
0501: VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
0601: NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
0701: SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
0801: KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
0901: VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1001: PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM EVKCSPEEWG KTSQPLIKPS SS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)