AT5G35753.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.984 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Domain of unknown function (DUF3444) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:13922569..13924648 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 67001.20 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.83 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.60 | ||||||||||||||||||||||||
| Length | 590 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEAYTQDALK AKQFAERRFA EKDFAGARSY ALRAKSLFPD LEGLSQMLTT NSIRRWLYCS IPTRTNALEL TEHFRSFRKL GVSCQLQKRL DTFWTVCTYC 101: KVQYEYLRKY VNKRLSCKNC RGAFIAVETG PAPVSASLQY APPSHTTSNG YGGHGYDAVS RMPTNSTYFL GQYPAHGYEY VTNESYDWSS YVGTSPGNLE 201: SNRMSSASNG YPYKLNNGVV LIKASRPEKK RNVGLGSSGN GFVENITKSN PESKATNLDA KMEHDFKHPG KSYGLMRRWS STTGLDTRKI LIHKAKTDIK 301: QRLEIMRLAS EAAATATEDA TPLDEVSASS KVGDDVSRLG KNVSFGHPPV RKINGPITVP DSDFHDFDKN RLEECFEARQ IWAIYDEDDG MPRLYCMVRE 401: VLSVQPFKID IAYLSSKTDI EFGTMKWVQY GFTKSCGHFR IRNTDIVDHV NIFSHLLKGK KTGRGGCVRI FPQTGDIWTV YKNWSPNWNN STPDEVRHQY 501: KMVEILDEYS EQFGVCIAPL VKVDGYKTVY CRRDKEESKK WIPRREMLRF SHQVPSRFLK EETCGVPGNC WDLDPSAIPE ELLHNGAGTD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)