AT3G09830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G03320.1); Has 111504 Blast hits to 110404 proteins in 3909 species: Archae - 89; Bacteria - 12797; Metazoa - 40929; Fungi - 9447; Plants - 32155; Viruses - 381; Other Eukaryotes - 15706 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3017199..3018696 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46793.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.02 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 418 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKCFLFSGGD KRGEQKTPIS VSLTSIFSDR EINRSGSEFN SRDVSGTSTE SSMGRKNSYP PVSTRASNLR EFSITDLKSA TKNFSRSVMI GEGGFGCVFR 101: GTVRNLEDSS VKIEVAVKQL GKRGLQGHKE WVTEVNFLGI VEHTNLVKLL GYCAEDDERG IQRLLVYEYM PNRSVEFHLS PRSLTVLTWD LRLRIAQDAA 201: RGLTYLHEEM EFQIIFRDFK SSNILLDEDW KAKLSDFGLA RLGPSEGLTH VSTDVVGTMG YAAPEYIQTG RLTSKSDVWG YGVFLYELIT GRRPVDRNRP 301: KGEQKLLEWV RPYLSDTRKF KLILDPRLEG KYPIKSVQKL AVVANRCLVR NSKARPKMSE VLEMVNKIVE ASSGNGSPQL VPLNSVKASR DARGKNNGGG 401: GEGGWFGKLW NPKTIRAC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)