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AT3G09830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22318864 (2012): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G03320.1); Has 111504 Blast hits to 110404 proteins in 3909 species: Archae - 89; Bacteria - 12797; Metazoa - 40929; Fungi - 9447; Plants - 32155; Viruses - 381; Other Eukaryotes - 15706 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G09830-MONOMERBioCyc:ARA:GQT-772-MONOMEReggNOG:COG0515eggNOG:KOG1187
EMBL:AC015985EMBL:AY091117EMBL:AY122981EMBL:CP002686
EnsemblPlants:AT3G09830EnsemblPlants:AT3G09830.1EnsemblPlants:AT3G09830.2entrez:820141
Gene3D:2.60.120.200GeneID:820141GO:GO:0004672GO:GO:0005524
GO:GO:0005886Gramene:AT3G09830.1Gramene:AT3G09830.2hmmpanther:PTHR27001
hmmpanther:PTHR27001:SF29InterPro:IPR000719InterPro:IPR001245InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT3G09830OMA:IKNSDEP
Pfam:PF07714Pfscan:PS50011PhylomeDB:Q9SF86PROSITE:PS00107
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_187594.1RefSeq:NP_974270.1
scanprosite:PS00107SMR:Q9SF86STRING:3702.AT3G09830.1SUPFAM:SSF56112
TAIR:AT3G09830UniGene:At.27699UniProt:Q9SF86
Coordinates (TAIR10) chr3:+:3017199..3018696
Molecular Weight (calculated) 46793.10 Da
IEP (calculated) 10.02
GRAVY (calculated) -0.43
Length 418 amino acids
Sequence (TAIR10)
(BLAST)
001: MKCFLFSGGD KRGEQKTPIS VSLTSIFSDR EINRSGSEFN SRDVSGTSTE SSMGRKNSYP PVSTRASNLR EFSITDLKSA TKNFSRSVMI GEGGFGCVFR
101: GTVRNLEDSS VKIEVAVKQL GKRGLQGHKE WVTEVNFLGI VEHTNLVKLL GYCAEDDERG IQRLLVYEYM PNRSVEFHLS PRSLTVLTWD LRLRIAQDAA
201: RGLTYLHEEM EFQIIFRDFK SSNILLDEDW KAKLSDFGLA RLGPSEGLTH VSTDVVGTMG YAAPEYIQTG RLTSKSDVWG YGVFLYELIT GRRPVDRNRP
301: KGEQKLLEWV RPYLSDTRKF KLILDPRLEG KYPIKSVQKL AVVANRCLVR NSKARPKMSE VLEMVNKIVE ASSGNGSPQL VPLNSVKASR DARGKNNGGG
401: GEGGWFGKLW NPKTIRAC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)