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AT1G51760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : endoplasmic reticulum 16618929
SwissProt : endoplasmic reticulum 16381842
TAIR : plasma membrane 17317660
TAIR : endoplasmic reticulum 16618929
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22550958 (2012): plastid
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peptidase M20/M25/M40 family protein
Curator
Summary (TAIR10)
encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.
Computational
Description (TAIR10)
IAA-ALANINE RESISTANT 3 (IAR3); FUNCTIONS IN: metallopeptidase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, response to wounding; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like gene 5 (TAIR:AT1G51780.1); Has 13368 Blast hits to 13360 proteins in 1987 species: Archae - 133; Bacteria - 9793; Metazoa - 95; Fungi - 261; Plants - 323; Viruses - 0; Other Eukaryotes - 2763 (source: NCBI BLink).
Protein Annotations
BioCyc:RETL1328306-WGS:GSTH-3488-MONOMERBioGrid:26827ChEMBL:CHEMBL1687678EC:3.5.1.-
eggNOG:COG1473eggNOG:ENOG410IIRPEMBL:AC025294EMBL:AF081067
EMBL:AF375444EMBL:AY143961EMBL:CP002684EMBL:Y13577
EnsemblPlants:AT1G51760EnsemblPlants:AT1G51760.1entrez:841602Gene3D:3.30.70.360
GeneID:841602Genevisible:O04373GO:GO:0005783GO:GO:0005788
GO:GO:0005886GO:GO:0009611GO:GO:0010179Gramene:AT1G51760.1
gramene_pathway:3.5.1.-gramene_pathway:PWY-1822hmmpanther:PTHR11014hmmpanther:PTHR11014:SF55
HOGENOM:HOG000241403InParanoid:O04373InterPro:IPR002933InterPro:IPR011650
InterPro:IPR017439iPTMnet:O04373KEGG:ath:AT1G51760KO:K14664
MEROPS:M20.A04OMA:HPDETEHPaxDb:O04373Pfam:O04373
Pfam:PF01546Pfam:PF07687Pfscan:PS51257PhylomeDB:O04373
PIR:F96556PIRSF:PIRSF005962PRIDE:O04373PRO:PR:O04373
PROSITE:PS00014ProteinModelPortal:O04373Proteomes:UP000006548RefSeq:NP_175587.1
SMR:O04373STRING:3702.AT1G51760.1SUPFAM:SSF53187SUPFAM:SSF55031
TAIR:AT1G51760tair10-symbols:IAR3tair10-symbols:JR3TIGRfam:TIGR01891
TIGRFAMs:TIGR01891UniGene:At.52138UniGene:At.5375UniProt:O04373
Coordinates (TAIR10) chr1:+:19199562..19201424
Molecular Weight (calculated) 48266.20 Da
IEP (calculated) 6.73
GRAVY (calculated) -0.07
Length 440 amino acids
Sequence (TAIR10)
(BLAST)
001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)