AT3G51450.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:vacuole 0.999 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Calcium-dependent phosphotriesterase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51430.1); Has 1424 Blast hits to 1412 proteins in 332 species: Archae - 38; Bacteria - 499; Metazoa - 223; Fungi - 14; Plants - 451; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:19091013..19092393 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 41126.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.40 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 371 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPVLFSSRSL ILSIIVPLLI SIALYKLDTF DPAIVPSDAF TSSATSLPPL INDEFLTGAE FIGVGLLNIP EDIAYHKESN LIYTGCVDGW VKRVKVADSV 101: NDSVVEDWVN TGGRPLGIAF GIHGEVIVAD VHKGLLNISG DGKKTELLTD EADGVKFKLT DAVTVADNGV LYFTDASYKY TLNQLSLDML EGKPFGRLLS 201: FDPTTRVTKV LLKDLYFANG ITISPDQTHL IFCETPMKRC SKYYISEERV EVFTQSLPGY PDNIRYDGDG HYWIALPSGV TTLWNISLKY PFLRKLTAMV 301: AKYGVDLMFM ENAGVLQVDL DGNPIAYYHD PKLSHIATCD KIGKYLYCGS LSQSHILRLD LLKYPAQNKK L |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)