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AT5G63930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63930-MONOMERBioGrid:21756EC:2.7.11.1eggNOG:COG0515
eggNOG:COG4886eggNOG:ENOG410IINBEMBL:AB019227EMBL:CP002688
EMBL:FJ708814EnsemblPlants:AT5G63930EnsemblPlants:AT5G63930.1entrez:836514
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:836514Genevisible:Q9LVP0
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0016021
Gramene:AT5G63930.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF191HOGENOM:HOG000116551
InParanoid:Q9LVP0InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320
InterPro:IPR032675KEGG:ath:AT5G63930OMA:CNHQGSNPaxDb:Q9LVP0
Pfam:PF00069Pfam:PF08263Pfam:PF13855Pfam:Q9LVP0
Pfscan:PS50011PhylomeDB:Q9LVP0PRIDE:Q9LVP0PRO:PR:Q9LVP0
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9LVP0Proteomes:UP000006548
RefSeq:NP_201198.1scanprosite:PS00108SMART:SM00220SMART:SM00369
SMR:Q9LVP0STRING:3702.AT5G63930.1SUPFAM:SSF52047SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT5G63930TMHMM:TMhelixUniGene:At.27808
UniProt:Q9LVP0
Coordinates (TAIR10) chr5:+:25583006..25586392
Molecular Weight (calculated) 120484.00 Da
IEP (calculated) 5.93
GRAVY (calculated) 0.02
Length 1102 amino acids
Sequence (TAIR10)
(BLAST)
0001: MVKEMMKLAV FFISLLLILL ISETTGLNLE GQYLLEIKSK FVDAKQNLRN WNSNDSVPCG WTGVMCSNYS SDPEVLSLNL SSMVLSGKLS PSIGGLVHLK
0101: QLDLSYNGLS GKIPKEIGNC SSLEILKLNN NQFDGEIPVE IGKLVSLENL IIYNNRISGS LPVEIGNLLS LSQLVTYSNN ISGQLPRSIG NLKRLTSFRA
0201: GQNMISGSLP SEIGGCESLV MLGLAQNQLS GELPKEIGML KKLSQVILWE NEFSGFIPRE ISNCTSLETL ALYKNQLVGP IPKELGDLQS LEFLYLYRNG
0301: LNGTIPREIG NLSYAIEIDF SENALTGEIP LELGNIEGLE LLYLFENQLT GTIPVELSTL KNLSKLDLSI NALTGPIPLG FQYLRGLFML QLFQNSLSGT
0401: IPPKLGWYSD LWVLDMSDNH LSGRIPSYLC LHSNMIILNL GTNNLSGNIP TGITTCKTLV QLRLARNNLV GRFPSNLCKQ VNVTAIELGQ NRFRGSIPRE
0501: VGNCSALQRL QLADNGFTGE LPREIGMLSQ LGTLNISSNK LTGEVPSEIF NCKMLQRLDM CCNNFSGTLP SEVGSLYQLE LLKLSNNNLS GTIPVALGNL
0601: SRLTELQMGG NLFNGSIPRE LGSLTGLQIA LNLSYNKLTG EIPPELSNLV MLEFLLLNNN NLSGEIPSSF ANLSSLLGYN FSYNSLTGPI PLLRNISMSS
0701: FIGNEGLCGP PLNQCIQTQP FAPSQSTGKP GGMRSSKIIA ITAAVIGGVS LMLIALIVYL MRRPVRTVAS SAQDGQPSEM SLDIYFPPKE GFTFQDLVAA
0801: TDNFDESFVV GRGACGTVYK AVLPAGYTLA VKKLASNHEG GNNNNVDNSF RAEILTLGNI RHRNIVKLHG FCNHQGSNLL LYEYMPKGSL GEILHDPSCN
0901: LDWSKRFKIA LGAAQGLAYL HHDCKPRIFH RDIKSNNILL DDKFEAHVGD FGLAKVIDMP HSKSMSAIAG SYGYIAPEYA YTMKVTEKSD IYSYGVVLLE
1001: LLTGKAPVQP IDQGGDVVNW VRSYIRRDAL SSGVLDARLT LEDERIVSHM LTVLKIALLC TSVSPVARPS MRQVVLMLIE SERSEGEQEH LDTEELTQTT
1101: TP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)