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AT3G51350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51330.1); Has 2922 Blast hits to 2911 proteins in 289 species: Archae - 2; Bacteria - 28; Metazoa - 564; Fungi - 406; Plants - 1751; Viruses - 2; Other Eukaryotes - 169 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:CP002686EnsemblPlants:AT3G51350
EnsemblPlants:AT3G51350.1entrez:824298Gene3D:2.40.70.10GeneID:824298
GO:GO:0004190GO:GO:0031225Gramene:AT3G51350.1hmmpanther:PTHR13683
hmmpanther:PTHR13683:SF232InParanoid:F4J3C0InterPro:IPR001461InterPro:IPR001969
InterPro:IPR021109InterPro:IPR032799InterPro:IPR032861InterPro:IPR033121
KEGG:ath:AT3G51350MEROPS:A01.A45OMA:CFGRVIGPANTHER:PTHR13683
PaxDb:F4J3C0Pfam:PF14541Pfam:PF14543Pfscan:PS51767
PRIDE:F4J3C0PRINTS:PR00792PROSITE:PS00141PROSITE:PS51767
ProteinModelPortal:F4J3C0Proteomes:UP000006548RefSeq:NP_190703.2scanprosite:PS00141
SMR:F4J3C0STRING:3702.AT3G51350.1SUPFAM:SSF50630TAIR:AT3G51350
UniGene:At.50266UniProt:F4J3C0
Coordinates (TAIR10) chr3:-:19060485..19063248
Molecular Weight (calculated) 56853.00 Da
IEP (calculated) 5.51
GRAVY (calculated) 0.02
Length 528 amino acids
Sequence (TAIR10)
(BLAST)
001: MDVARQVFVL LSVLVVCWGF ERCEATGKFG FEVHHIFSDS VKQSLGLGDL VPEQGSLEYF KVLAHRDRLI RGRGLASNND ETPITFDGGN LTVSVKLLGS
101: LYYANVSVGT PPSSFLVALD TGSDLFWLPC NCGTTCIRDL EDIGVPQSVP LNLYTPNAST TSSSIRCSDK RCFGSKKCSS PSSICPYQIS YSNSTGTKGT
201: LLQDVLHLAT EDENLTPVKA NVTLGCGQKQ TGLFQRNNSV NGVLGLGIKG YSVPSLLAKA NITANSFSMC FGRVIGNVGR ISFGDRGYTD QEETPFISVA
301: PSTAYGVNIS GVSVAGDPVD IRLFAKFDTG SSFTHLREPA YGVLTKSFDE LVEDRRRPVD PELPFEFCYD LSPNATTIQF PLVEMTFIGG SKIILNNPFF
401: TARTQEGNVM YCLGVLKSVG LKINVIGQNF VAGYRIVFDR ERMILGWKQS LCFEDESLES TTPPPPEVEA PAPSVSAPPP RSLPPTVSAT PPPINPRNST
501: GNPGTGGAAN LIPLASQLLL LLPLLAFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)