AT3G51350.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Eukaryotic aspartyl protease family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51330.1); Has 2922 Blast hits to 2911 proteins in 289 species: Archae - 2; Bacteria - 28; Metazoa - 564; Fungi - 406; Plants - 1751; Viruses - 2; Other Eukaryotes - 169 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:19060485..19063248 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 56853.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.51 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 528 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDVARQVFVL LSVLVVCWGF ERCEATGKFG FEVHHIFSDS VKQSLGLGDL VPEQGSLEYF KVLAHRDRLI RGRGLASNND ETPITFDGGN LTVSVKLLGS 101: LYYANVSVGT PPSSFLVALD TGSDLFWLPC NCGTTCIRDL EDIGVPQSVP LNLYTPNAST TSSSIRCSDK RCFGSKKCSS PSSICPYQIS YSNSTGTKGT 201: LLQDVLHLAT EDENLTPVKA NVTLGCGQKQ TGLFQRNNSV NGVLGLGIKG YSVPSLLAKA NITANSFSMC FGRVIGNVGR ISFGDRGYTD QEETPFISVA 301: PSTAYGVNIS GVSVAGDPVD IRLFAKFDTG SSFTHLREPA YGVLTKSFDE LVEDRRRPVD PELPFEFCYD LSPNATTIQF PLVEMTFIGG SKIILNNPFF 401: TARTQEGNVM YCLGVLKSVG LKINVIGQNF VAGYRIVFDR ERMILGWKQS LCFEDESLES TTPPPPEVEA PAPSVSAPPP RSLPPTVSAT PPPINPRNST 501: GNPGTGGAAN LIPLASQLLL LLPLLAFL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)