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AT3G51340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.685
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:CP002686EnsemblPlants:AT3G51340
EnsemblPlants:AT3G51340.1entrez:824297Gene3D:2.40.70.10GeneID:824297
GO:GO:0004190Gramene:AT3G51340.1hmmpanther:PTHR13683hmmpanther:PTHR13683:SF232
InParanoid:F4J3B9InterPro:IPR001461InterPro:IPR001969InterPro:IPR021109
InterPro:IPR032799InterPro:IPR032861InterPro:IPR033121KEGG:ath:AT3G51340
MEROPS:A01.A44PANTHER:PTHR13683PaxDb:F4J3B9Pfam:PF14541
Pfam:PF14543Pfscan:PS51767PRIDE:F4J3B9PRINTS:PR00792
PROSITE:PS00141PROSITE:PS51767ProteinModelPortal:F4J3B9Proteomes:UP000006548
RefSeq:NP_190702.2scanprosite:PS00141SMR:F4J3B9STRING:3702.AT3G51340.1
SUPFAM:SSF50630TAIR:AT3G51340TMHMM:TMhelixUniGene:At.53888
UniProt:F4J3B9
Coordinates (TAIR10) chr3:-:19057013..19059788
Molecular Weight (calculated) 58002.80 Da
IEP (calculated) 4.74
GRAVY (calculated) -0.07
Length 530 amino acids
Sequence (TAIR10)
(BLAST)
001: MNVARQVFVL LSMLVLIFWG LERCEASGKF SFEVHHMFSD VVKQTLGFDD LVPENGSLEY FKVLAHRDRF IRGRGLASNN EETPLTSIGS NLTLALNFLG
101: FLHYANVSLG TPATWFLVAL DTGSDLFWLP CNCGTTCIHD LKDARFSESV PLNLYTPNAS TTSSSIRCSD KRCFGSGKCS SPESICPYQI ALSSNTVTTG
201: TLLQDVLHLV TEDEDLKPVN ANVTLGCGQN QTGAFQTDIA VNGVLGLSMK EYSVPSLLAK ANITANSFSM CFGRIISVVG RISFGDKGYT DQEETPLVSL
301: ETSTAYGVNV TGVSVGGVPV DVPLFALFDT GSSFTLLLES AYGVFTKAFD DLMEDKRRPV DPDFPFEFCY DLREEHLNSD ARPRHMQSKC YNPCRDDFRW
401: RIQNDSQESV SYSNEGTKMY CLGILKSINL NIIGQNLMSG HRIVFDRERM ILGWKQSNCF EDESLASESP PPPEIEAPPP SVSTPPPAAS ATPPTIDPRN
501: STRNSGTGGA ANLSPLAAQL LFLLPLLAFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)